LINcoding
This software allows from an allelic profiles to create LIN codes.
Installation
Requirements
This tool is developed in Python3. It uses numpy, copy, argparse, itertools, random and re library.
How does it work ?
Please, read the help message for advanced features on the tool.
python LINcoding -hThe necessary commands :
- allelic profiles file
-i : BIGSdb.txt #tab-separated values file- column numbers of the selected identifiers
-t : 1-2 #column 1 to 2
#or
-t : 1,5 #column 1 and 5
#or
-t : 1-3,5 #column 1 to 3 and 5- column numbers of the chosen alleles
-l : 3- #column 3 to all others
#or
-l : 3-15 #column 3 to 15
#or
-l : 5-10,206 #column 5 to 10 and 206- set of thresholds (in percentage) if -i does not exist
-b : 60.0,90,95.6,100 #100% is obligatory
#valeurs "int" : 60
#valeurs "float" : 60.5 Optional commands :
If Database exist :
-i new_Ecoli.txt -r BIGSdb.linExample
The directory example contains allelic profiles file of Elizabethkingia. This file is download on the site following : http://bigsdb.pasteur.fr/elizabethkingia/elizabethkingia.html BIGSdb_eliza.txt contains 100 allelic profiles of the bacteria Elizabethkingia, with 1546 loci. BIGSdb_eliza_update.txt contains 12 allelic profiles of the bacteria Elizabethkingia, with 1546 loci. It's for update when BIGSdb_eliza.lin is create. Identifiants bacterial is in column 1-2 and all others is loci.
In the example folder, you have example files from the following command:
Create DataBase LIN :
python LINcode.py -i BIGSdb_eliza.txt -t 1-2 -l 3- -b 10,20,50,80,99.68,99.74,99.81,99.87,99.94,100This code ligne return :
- .lin file :
[ 10. 20. 50. 80. 99.68 99.74 99.81 99.87 99.94 100. ] D505_00725 D505_00825 D505_00850 D505_00855 D505_00865 D505_00875 D505_00880 D505_00900 D505_00905 D505_00910 D505_00915 D505_01275 D505_01285 D505_01300 D505_01310 D505_01315 D505_01435 D505_01485 D505_01530 D505_01535 D505_01570 D505_01600 D505_01605 D505_01610 D505_01615 D505_01630 D505_01635 D505_01650 D505_01660 D505_01670 D505_01675 D505_01695 D505_01700 D505_01705 D505_01710 D505_01715 D505_01725 D505_01730 D505_01735 D505_01755 D505_01765 D505_01780 D505_01785 D505_01800 D505_01810 D505_01860 D505_01865 D505_01880 D505_01890 D505_01905 D505_01910 D505_01915 D505_01925 D505_01930 D505_01935 D505_01950 D505_01955 D505_01965 D505_01970 D505_01980 D505_01990 D505_02000 D505_02005 D505_02010 D505_02015 D505_02030 D505_02035 D505_02040 D505_02045 D505_02065 D505_02070 D505_02085 D505_02090 D505_02095 D505_02110 D505_02115 D505_02120 D505_02125 D505_02130 D505_02135 D505_02140 D505_02145 D505_02150 D505_02155 D505_02160 D505_02165 D505_02170 D505_02185 D505_02195 D505_02215 D505_02220 D505_02225 D505_02235 D505_02240 D505_02250 D505_02260 D505_02265 D505_02270 D505_02275 D505_02280 D505_02315 D505_02325 D505_02330 D505_02340 D505_02345 D505_02350 D505_02355 D505_02360 D505_02370 D505_02375 D505_02390 D505_02395 D505_02400 D505_02405 D505_02410 D505_02415 D505_02445 D505_02465 D505_02470 D505_02485 D505_02490 D505_02767 D505_02792 D505_02797 D505_02812 D505_02832 D505_02897 D505_02902 D505_02907 D505_02912 D505_02917 D505_02922 D505_02927 D505_02932 D505_02937 D505_02942 D505_02947 D505_02952 D505_02967 D505_02972 D505_02982 D505_02987 D505_02992 D505_02997 D505_03022 D505_03027 D505_03032 D505_03037 D505_03052 D505_03062 D505_03067 D505_03157 D505_03162 D505_03167 D505_03192 D505_03202 D505_03207 D505_03227 D505_03232 D505_03237 D505_03252 D505_03257 D505_03312 D505_03322 D505_03327 D505_03357 D505_03377 D505_03382 D505_03402 D505_03417 D505_03427 D505_03432 D505_03627 D505_03632 D505_03652 D505_03657 D505_03672 D505_03692 D505_03717 D505_03722 D505_03727 D505_03732 D505_03742 D505_03762 D505_03837 D505_03857 D505_03867 D505_04024 D505_04029 D505_04034 D505_04039 D505_04044 D505_04049 D505_04054 D505_04059 D505_04074 D505_04089 D505_04094 D505_04099 D505_04104 D505_04119 D505_04134 D505_04139 D505_04149 D505_04154 D505_04164 D505_04169 D505_04174 D505_04179 D505_04184 D505_04194 D505_04239 D505_04244 D505_04249 D505_04259 D505_04284 D505_04299 D505_04304 D505_04309 D505_04314 D505_04324 D505_04329 D505_04339 D505_04344 D505_04359 D505_04369 D505_04379 D505_04399 D505_04409 D505_04414 D505_04419 D505_04424 D505_04429 D505_04459 D505_04479 D505_04484 D505_04489 D505_04499 D505_04504 D505_04509 D505_04514 D505_04519 D505_04534 D505_04539 D505_04549 D505_04569 D505_04574 D505_04579 D505_04584 D505_04589 D505_04594 D505_04604 D505_04609 D505_04614 D505_04619 D505_04624 D505_04629 D505_04634 D505_04659 D505_04674 D505_04684 D505_04689 D505_04699 D505_04709 D505_04724 D505_04729 D505_04739 D505_04779 D505_04784 D505_04789 D505_04794 D505_04899 D505_04904 D505_04929 D505_04964 D505_04969 D505_04984 D505_04994 D505_04999 D505_05004 D505_05014 D505_05019 D505_05024 D505_05039 D505_05044 D505_05049 D505_05054 D505_05059 D505_05064 D505_05069 D505_05079 D505_05084 D505_05089 D505_05104 D505_05114 D505_05119 D505_05124 D505_05139 D505_05149 D505_05154 D505_05159 D505_05164 D505_05169 D505_05184 D505_05189 D505_05194 D505_05214 D505_05234 D505_05244 D505_05274 D505_05284 D505_05289 D505_05304 D505_05309 D505_05314 D505_05329 D505_05334 D505_05339 D505_05344 D505_05349 D505_05354 D505_05379 D505_05384 D505_05394 D505_05399 D505_05409 D505_05414 D505_05419 D505_05424 D505_05434 D505_05439 D505_05444 D505_05454 D505_05459 D505_05464 D505_05474 D505_05489 D505_05534 D505_05539 D505_05554 D505_05559 D505_05564 D505_05574 D505_05584 D505_05604 D505_05609 D505_05614 D505_05624 D505_05629 D505_05644 D505_05649 D505_05659 D505_05664 D505_05669 D505_05674 D505_05679 D505_05684 D505_05689 D505_05694 D505_05704 D505_05709 D505_05714 D505_05719 D505_05824 D505_05928 D505_05933 D505_05938 D505_05943 D505_05953 D505_05958 D505_05963 D505_05973 D505_05978 D505_05983 D505_05988 D505_06008 D505_06018 D505_06023 D505_06028 D505_06043 D505_06048 D505_06053 D505_06063 D505_06073 D505_06083 D505_06088 D505_06098 D505_06103 D505_06108 D505_06113 D505_06118 D505_06123 D505_06138 D505_06143 D505_06148 D505_06153 D505_06158 D505_06163 D505_06168 D505_06173 D505_06178 D505_06183 D505_06203 D505_06208 D505_06223 D505_06243 D505_06248 D505_06253 D505_06258 D505_06263 D505_06268 D505_06273 D505_06278 D505_06283 D505_06298 D505_06413 D505_06418 D505_06428 D505_06438 D505_06443 D505_06453 D505_06458 D505_06483 D505_06488 D505_06493 D505_06523 D505_06543 D505_06548 D505_06558 D505_06563 D505_06578 D505_06583 D505_06593 D505_06598 D505_06603 D505_06608 D505_06613 D505_06618 D505_06623 D505_06628 D505_06633 D505_06638 D505_06643 D505_06653 D505_06673 D505_06688 D505_06693 D505_06703 D505_06708 D505_06713 D505_06728 D505_06743 D505_06748 D505_06753 D505_06758 D505_06763 D505_06768 D505_06778 D505_06798 D505_06808 D505_06823 D505_06833 D505_06838 D505_06848 D505_06868 D505_06873 D505_06878 D505_06883 D505_06888 D505_06893 D505_06898 D505_06908 D505_06913 D505_06918 D505_06938 D505_06948 D505_06958 D505_06963 D505_06968 D505_06973 D505_06978 D505_06993 D505_06998 D505_07003 D505_07013 D505_07018 D505_07023 D505_07028 D505_07038 D505_07048 D505_07053 D505_07068 D505_07073 D505_07078 D505_07083 D505_07098 D505_07103 D505_07113 D505_07118 D505_07123 D505_07138 D505_07143 D505_07153 D505_07158 D505_07168 D505_07173 D505_07188 D505_07193 D505_07198 D505_07223 D505_07228 D505_07238 D505_07248 D505_07253 D505_07263 D505_07293 D505_07308 D505_07313 D505_07318 D505_07333 D505_07338 D505_07343 D505_07358 D505_07363 D505_07368 D505_07373 D505_07378 D505_07383 D505_07388 D505_07393 D505_07398 D505_07403 D505_07413 D505_07423 D505_07518 D505_07528 D505_07533 D505_07538 D505_07543 D505_07548 D505_07553 D505_07568 D505_07573 D505_07583 D505_07588 D505_07593 D505_07598 D505_07603 D505_07613 D505_07623 D505_07628 D505_07633 D505_07658 D505_07663 D505_07668 D505_07673 D505_07683 D505_07688 D505_07718 D505_07728 D505_07748 D505_07768 D505_07778 D505_07783 D505_07813 D505_07823 D505_07833 D505_07838 D505_07843 D505_07848 D505_07858 D505_07868 D505_07873 D505_07878 D505_07888 D505_07903 D505_07908 D505_07918 D505_07933 D505_07938 D505_07948 D505_07958 D505_07963 D505_07968 D505_07973 D505_07978 D505_07983 D505_07988 D505_07993 D505_07998 D505_08003 D505_08013 D505_08033 D505_08038 D505_08043 D505_08048 D505_08053 D505_08063 D505_08068 D505_08088 D505_08093 D505_08098 D505_08145 D505_08215 D505_08220 D505_08225 D505_08235 D505_08240 D505_08250 D505_08255 D505_08265 D505_08280 D505_08285 D505_08300 D505_08305 D505_08325 D505_08370 D505_08420 D505_08485 D505_08495 D505_08500 D505_08505 D505_08525 D505_08530 D505_08540 D505_08545 D505_08550 D505_08555 D505_08565 D505_08570 D505_08575 D505_08610 D505_08620 D505_08635 D505_08640 D505_08650 D505_08670 D505_08680 D505_08685 D505_08690 D505_08695 D505_08700 D505_08705 D505_08745 D505_08765 D505_08780 D505_08785 D505_08795 D505_08800 D505_08805 D505_08810 D505_08825 D505_08835 D505_08840 D505_08845 D505_08850 D505_08855 D505_08860 D505_08865 D505_08870 D505_08875 D505_08880 D505_08890 D505_08900 D505_08925 D505_08930 D505_08975 D505_08980 D505_08985 D505_08990 D505_09000 D505_09005 D505_09015 D505_09050 D505_09055 D505_09113 D505_09128 D505_09133 D505_09138 D505_09143 D505_09148 D505_09163 D505_09168 D505_09178 D505_09193 D505_09203 D505_09208 D505_09233 D505_09238 D505_09248 D505_09253 D505_09268 D505_09283 D505_09288 D505_09293 D505_09348 D505_09433 D505_09453 D505_09463 D505_09468 D505_09473 D505_09508 D505_09518 D505_09593 D505_09598 D505_09638 D505_09658 D505_09698 D505_09703 D505_09708 D505_09718 D505_09728 D505_09733 D505_09748 D505_09758 D505_09763 D505_09773 D505_09778 D505_09783 D505_09788 D505_09793 D505_09798 D505_09803 D505_09808 D505_09818 D505_09828 D505_09833 D505_09843 D505_09853 D505_09858 D505_09863 D505_09868 D505_09873 D505_09878 D505_09883 D505_09888 D505_09893 D505_09898 D505_09918 D505_09923 D505_09933 D505_09938 D505_09943 D505_10007 D505_10012 D505_10017 D505_10037 D505_10047 D505_10057 D505_10062 D505_10067 D505_10077 D505_10082 D505_10087 D505_10092 D505_10097 D505_10102 D505_10122 D505_10127 D505_10132 D505_10137 D505_10182 D505_10187 D505_10197 D505_10202 D505_10217 D505_10227 D505_10242 D505_10252 D505_10277 D505_10287 D505_10297 D505_10302 D505_10307 D505_10312 D505_10322 D505_10327 D505_10352 D505_10357 D505_10362 D505_10367 D505_10372 D505_10377 D505_10382 D505_10387 D505_10392 D505_10397 D505_10417 D505_10422 D505_10437 D505_10447 D505_10452 D505_10457 D505_10462 D505_10472 D505_10477 D505_10492 D505_10502 D505_10512 D505_10532 D505_10537 D505_10542 D505_10547 D505_10552 D505_10557 D505_10567 D505_10582 D505_10587 D505_10597 D505_10602 D505_10612 D505_10617 D505_10622 D505_10632 D505_10637 D505_10652 D505_10682 D505_10697 D505_10707 D505_10717 D505_10737 D505_10742 D505_10747 D505_10752 D505_10757 D505_10767 D505_10777 D505_10782 D505_10792 D505_10797 D505_10802 D505_10807 D505_10812 D505_10817 D505_10822 D505_10827 D505_10847 D505_10852 D505_10862 D505_10867 D505_10877 D505_10892 D505_10902 D505_10907 D505_10912 D505_10917 D505_10927 D505_10932 D505_10937 D505_10982 D505_10987 D505_10992 D505_10997 D505_11002 D505_11007 D505_11017 D505_11022 D505_11027 D505_11037 D505_11042 D505_11047 D505_11057 D505_11082 D505_11102 D505_11112 D505_11117 D505_11122 D505_11127 D505_11152 D505_11157 D505_11182 D505_11192 D505_11197 D505_11226 D505_11231 D505_11241 D505_11251 D505_11256 D505_11266 D505_11271 D505_11281 D505_11286 D505_11291 D505_11296 D505_11306 D505_11311 D505_11321 D505_11331 D505_11336 D505_11341 D505_11351 D505_11356 D505_11361 D505_11376 D505_11381 D505_11386 D505_11391 D505_11401 D505_11406 D505_11411 D505_11426 D505_11441 D505_11446 D505_11466 D505_11481 D505_11491 D505_11501 D505_11506 D505_11511 D505_11516 D505_11556 D505_11561 D505_11566 D505_11571 D505_11576 D505_11581 D505_11586 D505_11591 D505_11601 D505_11606 D505_11621 D505_11636 D505_11641 D505_11646 D505_11651 D505_11661 D505_11686 D505_11691 D505_11706 D505_11716 D505_11721 D505_11746 D505_11751 D505_11756 D505_11771 D505_11786 D505_11801 D505_11806 D505_11811 D505_11816 D505_11826 D505_11831 D505_11846 D505_11856 D505_11881 D505_11886 D505_11906 D505_11916 D505_11931 D505_11961 D505_11966 D505_11976 D505_11986 D505_11991 D505_11996 D505_12001 D505_12076 D505_12081 D505_12086 D505_12091 D505_12096 D505_12106 D505_12111 D505_12141 D505_12151 D505_12156 D505_12161 D505_12181 D505_12186 D505_12191 D505_12196 D505_12216 D505_12221 D505_12226 D505_12241 D505_12266 D505_12271 D505_12276 D505_12281 D505_12286 D505_12296 D505_12301 D505_12306 D505_12311 D505_12321 D505_12326 D505_12331 D505_12336 D505_12465 D505_12550 D505_12555 D505_12570 D505_12585 D505_12590 D505_12600 D505_12605 D505_12610 D505_12625 D505_12630 D505_12640 D505_12645 D505_12650 D505_12655 D505_12660 D505_12665 D505_12680 D505_12685 D505_12690 D505_12710 D505_12720 D505_12735 D505_12745 D505_12760 D505_12770 D505_12775 D505_12785 D505_12790 D505_12795 D505_12800 D505_12805 D505_12810 D505_12815 D505_12825 D505_12840 D505_12850 D505_12865 D505_12870 D505_12875 D505_12880 D505_12885 D505_12895 D505_12905 D505_12910 D505_12915 D505_12925 D505_12930 D505_12940 D505_12945 D505_12970 D505_12975 D505_12980 D505_12985 D505_12990 D505_12995 D505_13005 D505_13010 D505_13015 D505_13020 D505_13025 D505_13030 D505_13035 D505_13045 D505_13050 D505_13060 D505_13065 D505_13070 D505_13075 D505_13085 D505_13095 D505_13115 D505_13120 D505_13150 D505_13155 D505_13160 D505_13165 D505_13170 D505_13175 D505_13200 D505_13215 D505_13220 D505_13235 D505_13240 D505_13250 D505_13255 D505_13265 D505_13270 D505_13285 D505_13310 D505_13325 D505_13340 D505_13345 D505_13355 D505_13360 D505_13380 D505_13385 D505_13400 D505_13405 D505_13410 D505_13415 D505_13425 D505_13435 D505_13440 D505_13445 D505_13450 D505_13455 D505_13475 D505_13485 D505_13490 D505_13495 D505_13500 D505_13505 D505_13520 D505_13550 D505_13555 D505_13560 D505_13575 D505_13585 D505_13600 D505_13605 D505_13632 D505_13637 D505_13642 D505_13647 D505_13652 D505_13662 D505_13667 D505_13672 D505_13682 D505_13687 D505_13692 D505_13702 D505_13707 D505_13717 D505_13722 D505_13747 D505_13752 D505_13772 D505_13777 D505_13782 D505_13862 D505_13877 D505_13887 D505_13902 D505_13912 D505_13917 D505_13927 D505_13932 D505_13942 D505_13947 D505_13952 D505_13957 D505_13962 D505_13967 D505_13977 D505_13982 D505_13997 D505_14002 D505_14007 D505_14012 D505_14017 D505_14037 D505_14042 D505_14047 D505_14057 D505_14062 D505_14067 D505_14092 D505_14107 D505_14127 D505_14132 D505_14147 D505_14152 D505_14157 D505_14162 D505_14167 D505_14187 D505_14197 D505_14202 D505_14207 D505_14217 D505_14257 D505_14262 D505_14272 D505_14282 D505_14287 D505_14292 D505_14297 D505_14302 D505_14307 D505_14322 D505_14337 D505_14347 D505_14352 D505_14357 D505_14362 D505_14367 D505_14372 D505_14387 D505_14392 D505_14397 D505_14402 D505_14407 D505_14412 D505_14417 D505_14422 D505_14427 D505_14432 D505_14442 D505_14452 D505_14492 D505_14502 D505_14507 D505_14517 D505_14522 D505_14532 D505_14537 D505_14542 D505_14557 D505_14562 D505_14567 D505_14577 D505_14582 D505_14587 D505_14602 D505_14607 D505_14612 D505_14622 D505_14662 D505_14677 D505_14702 D505_14707 D505_14717 D505_14742 D505_14757 D505_14812 D505_14817 D505_14857 D505_14867 D505_14872 D505_14937 D505_14998 D505_15003 D505_15008 D505_15023 D505_15043 D505_15053 D505_15088 D505_15093 D505_15103 D505_15118 D505_15128 D505_15138 D505_15148 D505_15153 D505_15183 D505_15198 D505_15208 D505_15218 D505_15223 D505_15233 D505_15243 D505_15248 D505_15253 D505_15258 D505_15263 D505_15268 D505_15273 D505_15278 D505_15283 D505_15293 D505_15308 D505_15313 D505_15323 D505_15328 D505_15368 D505_15373 D505_15388 D505_15398 D505_15403 D505_15408 D505_15413 D505_15423 D505_15428 D505_15438 D505_15448 D505_15463 D505_15468 D505_15478 D505_15488 D505_15518 D505_15523 D505_15528 D505_15533 D505_15538 D505_15543 D505_15578 D505_15588 D505_15593 D505_15598 D505_15603 D505_15628 D505_15633 D505_15638 D505_15643 D505_15663 D505_15668 D505_15673 D505_15683 D505_15688 D505_15698 D505_15713 D505_15718 D505_15723 D505_15733 D505_15743 D505_15748 D505_15758 D505_15763 D505_15768 D505_15773 D505_15778 D505_15783 D505_15788 D505_15803 D505_15813 D505_15848 D505_15858 D505_15863 D505_15868 D505_15873 D505_15878 D505_15888 D505_15898 D505_15903 D505_15908 D505_15953 D505_15958 D505_15963 D505_15973 D505_15978 D505_15983 D505_15988 D505_15993 D505_15998 D505_16003 D505_16013 D505_16023 D505_16028 D505_16033 D505_16038 D505_16043 D505_16048 D505_16058 D505_16063 D505_16068 D505_16078 D505_16083 D505_16088 D505_16093 D505_16098 D505_16113 D505_16118 D505_16128 D505_16138 D505_16163 D505_16173 D505_16178 D505_16183 D505_16188 D505_16193 D505_16263 D505_16298 D505_16313 D505_16318 D505_16323 D505_16328 D505_16383 D505_16413 D505_16418 D505_16443 D505_16458 D505_16468 D505_16498 D505_16528 D505_16533 D505_16538 D505_16573 D505_16608 D505_16628 D505_16723 D505_16743 D505_16763 D505_16790 D505_16795 D505_16800 D505_16815 D505_16820 D505_16825 D505_16830 D505_16845 D505_16850 D505_16865 D505_16890 D505_16895 D505_16905 D505_16910 D505_16930 D505_16950 D505_16955 D505_16960 D505_16965 D505_16980 D505_16985 D505_17015 D505_17020 D505_17050 D505_17055 D505_17085 D505_17090 D505_17100 D505_17110 D505_17120 D505_17135 D505_17180 D505_17185 D505_17205 D505_17210 D505_17225 D505_17235 D505_17240 D505_17245 D505_17250 D505_17255 D505_17260 D505_17270 D505_17275 D505_17315 D505_17340 D505_17355 D505_17415 D505_17425 D505_17460 D505_17470 D505_17475 D505_17480 D505_17490 D505_17510 D505_17520 D505_17535 D505_17540 D505_17545 D505_17550 D505_17560 D505_17570 D505_17575 D505_17585 D505_17595 D505_17600 D505_17605 D505_17610 D505_17615 D505_17620 D505_17625 D505_17630 D505_17635 D505_17640 D505_17645 D505_17650 D505_17655 D505_17665 D505_17695 D505_17705 D505_17715 D505_17720 D505_17725 D505_17735 D505_17740 D505_17745 D505_17750 D505_17765 D505_17770 D505_17795 D505_17800 D505_17805 D505_17840 D505_17845 D505_17850 D505_17860 D505_17880 D505_17895 D505_17905 D505_17930 D505_17955 D505_17965 D505_17975 D505_17995 D505_18010 D505_18015 D505_18020 D505_18025 D505_18030 D505_18035 D505_18040 D505_18045 D505_18065 D505_18075 D505_18085 D505_18090 D505_18095 D505_18105 D505_18115 D505_18125 D505_18130 D505_18140 D505_18145 D505_18155 D505_18160 D505_18165 D505_18175 D505_18180 D505_18185 D505_18200 D505_18210 D505_18215 D505_18220 D505_18225 D505_18230 D505_18235 D505_18240 D505_18270 D505_18275 D505_18285 D505_18295 D505_18300 D505_18310 D505_18315 D505_18320 D505_18325 D505_18345 D505_18350 D505_18395 D505_18400 D505_18405 D505_18445 D505_18450 D505_18455 D505_18465 D505_18495 D505_18500 D505_18510 D505_18545 D505_18555 D505_18570 D505_18580 D505_18585 D505_18595
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16_0_0_0_0_0_0_0_0_0 9 6 0 0 0 4 9 6 5 8 0 0 6 6 6 8 0 6 8 0 0 6 6 4 8 0 6 0 6 5 6 6 0 5 7 6 6 6 6 8 9 6 6 0 6 6 8 6 6 6 8 8 0 6 9 0 6 0 6 6 7 4 0 6 5 0 4 4 5 5 0 5 5 0 8 5 0 0 7 4 6 5 5 5 6 5 0 0 6 6 6 6 9 7 7 6 5 9 8 0 6 6 3 0 4 6 0 6 0 5 0 6 3 8 6 5 4 6 0 8 8 0 6 8 0 5 6 6 6 6 6 6 6 9 6 5 4 9 5 6 0 5 6 6 0 5 0 6 9 6 6 8 7 6 4 10 0 5 6 9 9 0 6 8 6 6 0 0 8 8 7 0 6 6 8 6 9 6 6 0 0 8 5 6 9 6 5 0 6 8 7 5 8 7 0 6 8 5 6 5 7 7 7 5 5 5 5 6 8 0 0 5 8 6 6 5 5 9 9 8 6 6 6 8 6 8 9 6 0 5 0 0 6 9 6 6 6 6 0 6 9 6 5 6 6 5 5 6 6 6 6 5 5 6 6 5 7 6 0 0 6 9 7 6 0 0 0 6 6 6 5 6 0 0 6 0 0 6 8 6 0 6 9 6 6 8 0 6 5 0 6 5 6 0 9 6 0 6 5 6 5 6 5 0 6 9 6 6 9 0 6 6 7 8 0 8 9 6 10 6 9 8 5 6 5 6 0 7 6 6 5 6 0 5 4 4 0 8 9 6 0 0 6 5 5 6 6 0 6 6 9 5 6 8 6 8 5 6 6 5 4 4 0 0 5 5 3 8 6 6 6 5 0 0 4 0 0 5 7 0 6 6 5 2 8 6 6 0 4 8 3 4 3 8 5 5 3 5 6 6 6 6 6 6 6 6 5 9 9 9 6 5 4 6 6 8 8 8 6 0 7 4 5 5 3 0 6 6 8 4 6 8 5 6 6 6 5 6 6 7 4 6 5 6 5 6 6 5 7 8 8 6 6 7 4 5 5 9 0 9 6 6 5 8 6 5 8 6 5 6 5 8 8 0 9 6 7 0 8 5 6 0 5 7 8 0 7 6 6 6 3 5 8 5 4 6 6 6 6 6 8 5 5 5 8 6 5 6 7 9 5 6 6 0 6 7 0 6 2 6 7 6 6 5 6 9 6 4 0 7 4 0 6 6 6 0 0 5 0 9 6 7 6 6 6 6 4 9 5 6 6 4 6 4 5 0 6 5 6 8 9 5 6 8 0 6 5 5 5 6 7 7 6 4 6 6 0 6 6 7 6 6 6 4 6 3 6 8 5 6 3 6 6 7 6 7 9 5 6 6 6 6 6 7 9 3 8 6 6 0 5 6 0 0 3 0 0 8 6 6 6 6 6 6 9 3 6 6 6 4 6 8 6 5 5 5 8 6 8 6 6 8 8 6 9 0 5 5 9 6 6 6 8 4 0 6 7 6 5 6 7 6 4 8 6 6 0 2 11 5 8 5 6 4 6 0 0 7 6 8 5 0 6 8 6 6 6 6 9 6 0 6 6 5 6 6 0 6 6 6 6 6 6 6 0 0 0 8 8 6 0 9 9 6 6 5 4 6 6 4 7 5 6 4 7 6 6 4 6 5 7 0 3 8 5 0 6 6 6 8 6 6 6 9 6 8 5 4 0 5 7 3 5 7 5 6 6 6 5 5 7 5 6 0 6 9 6 5 6 6 6 9 6 7 6 4 5 6 4 8 6 0 0 6 5 8 6 4 5 8 2 4 5 3 6 6 4 6 0 0 0 5 9 6 4 0 6 5 6 6 5 0 9 6 6 0 6 5 8 6 6 8 4 0 6 3 0 0 6 6 6 7 5 5 3 8 6 6 6 0 7 5 8 6 6 4 5 6 6 5 9 5 0 5 6 4 3 2 6 6 6 0 6 8 5 9 0 8 8 4 6 0 5 6 0 5 0 0 9 6 7 5 6 6 0 7 0 5 9 7 5 9 5 6 6 6 5 9 6 6 9 6 9 6 6 0 5 6 4 4 6 6 5 5 6 6 5 3 3 4 5 4 3 3 3 3 5 6 4 5 4 6 9 9 0 9 3 7 3 3 6 6 8 0 6 6 6 6 8 6 6 6 5 8 0 0 6 3 0 8 8 9 6 9 6 6 9 9 5 5 0 5 5 4 6 7 6 6 7 6 0 6 5 6 0 8 9 6 9 4 6 6 6 6 4 6 6 6 4 6 8 6 10 8 4 4 4 0 8 6 6 8 0 5 6 6 6 6 5 6 6 8 6 6 6 0 5 6 6 5 6 6 8 5 6 6 5 6 0 8 9 0 0 6 6 0 0 6 6 6 2 5 6 6 6 6 6 6 9 4 0 6 5 0 0 0 7 3 6 8 4 5 8 8 6 6 8 6 8 6 6 4 6 5 4 6 9 0 6 6 6 6 6 6 6 5 2 6 4 6 7 6 0 4 6 4 2 0 0 6 6 7 6 6 5 0 0 8 6 0 0 0 6 8 9 7 5 0 8 3 6 6 9 3 6 4 6 8 6 6 3 8 6 0 6 5 5 0 4 8 6 6 6 8 7 4 0 6 9 9 9 6 4 6 6 8 6 5 8 6 8 9 9 6 6 6 8 6 5 6 6 6 5 0 8 6 8 6 0 6 5 8 5 7 6 6 0 0 5 9 6 8 6 6 4 8 0 8 6 6 0 7 8 0 6 0 0 7 6 0 6 0 6 0 0 6 0 0 0 7 6 6 6 8 6 3 6 6 0 0 6 6 6 6 0 6 6 6 9 6 6 8 6 6 6 6 0 0 8 9 0 4 6 0 4 5 0 0 6 0 7 7 5 6 8 7 0 8 6 6 7 0 8 6 0 0 6 6 5 6 6 6 6 9 9 8 0 6 5 6 6 6 4 0 4 6 3 6 6 6 6 5 5 6 6 8 0 0 5 6 6 0 6 0 6 0 0 0 10 5 0 0 4 5 5 8 6 6 6 6 6 6 6 6 0 7 6 6 3 5 6 2 6 4 0 0 0 7 5 6 6 7 0 0 0 0 6 8 6 8 5 0 6 0 0 0 9 0 0 0 8 0 6 8 5 7 5 0 6 6 8 0 6 7 0 0 8 0 8 0 0 0 9 6 6 8 8 6 6 0 0 6 0 6 0 0 0 6 6 8 6 6 6 10 9 6 0 0 6 6 0 6 5 4 3 0 0 4 6 6 5 4 6 7 5 3 6 6 4 6 5 4 5 5 3 3 6 6 6 0 9 9 3 3 8 6 6 6 0 5 6 6 6 5 6 8 6 5 6 7 6 6 9 6 6 0 6 2 0 4 5 8 5 6 4 3 0 7 6 5 4 0 6 6 2 6 6 9 8 6 6 4 6 6 6 6 6 0 0 6 6 7 5 9 7 5 8 4 9 6 6 7 6 0 0 8 6 6 6 6 4 8 6 5 9 4
16_0_0_0_0_1_0_0_0_0 9 6 0 0 0 4 9 6 5 8 0 0 6 6 6 8 0 6 8 0 0 6 6 4 8 0 6 0 6 5 6 6 0 5 7 6 6 6 6 8 9 6 6 0 6 6 8 6 6 6 8 8 0 6 9 0 6 0 6 6 7 4 0 6 5 0 4 4 5 5 0 5 5 0 8 5 0 0 7 4 6 5 5 5 6 5 0 0 6 6 6 6 9 7 7 6 5 9 8 0 6 6 3 0 4 6 0 6 0 5 0 6 3 8 6 5 4 6 0 8 8 0 6 8 0 5 6 6 6 6 6 6 6 9 6 5 5 9 5 6 0 5 6 6 0 5 0 6 9 6 6 8 7 6 4 10 0 5 6 9 9 0 6 8 6 6 0 0 8 8 7 0 6 6 8 6 9 0 6 0 0 8 5 6 9 6 5 0 6 8 7 5 8 7 0 6 8 5 6 5 7 7 7 5 5 5 5 6 8 0 0 5 8 6 6 5 5 9 9 8 6 6 6 8 6 8 9 6 0 5 0 0 6 9 6 6 6 6 0 6 9 6 5 6 6 5 5 6 6 6 6 5 5 6 6 5 7 6 0 0 6 9 7 6 0 0 0 6 6 6 5 6 0 0 6 0 0 6 8 6 0 6 9 6 6 8 0 6 5 0 6 5 6 0 9 6 0 6 5 6 5 6 5 0 6 9 6 6 9 0 6 6 7 8 0 8 9 6 10 6 9 8 5 6 5 6 0 7 6 6 5 6 0 5 4 4 0 8 9 6 0 0 6 5 5 6 6 0 6 6 9 5 6 8 6 8 5 6 6 5 4 4 0 0 5 5 3 8 6 6 6 5 0 0 4 0 0 5 7 0 6 6 5 2 8 6 6 0 4 8 3 4 3 8 5 5 3 5 6 6 6 6 6 6 6 6 5 9 9 9 6 5 4 6 6 8 8 8 6 0 7 4 5 5 3 0 6 6 8 4 6 8 5 6 6 6 9 6 6 7 4 6 5 6 5 6 6 5 7 8 8 6 6 7 4 5 5 9 0 9 6 6 5 8 6 5 8 6 5 6 5 8 8 0 9 6 7 0 8 5 6 0 5 7 8 0 7 6 6 6 3 5 8 5 4 6 6 6 6 6 8 5 5 5 8 6 5 6 7 9 5 6 6 0 6 7 0 6 2 6 7 6 6 5 6 9 6 4 0 7 4 0 6 6 6 0 0 5 0 9 6 7 6 6 6 6 4 9 5 6 6 4 6 4 5 0 6 5 6 8 9 5 6 8 0 6 5 5 5 6 7 7 6 4 6 6 0 6 6 7 6 6 6 4 6 3 6 8 5 6 3 6 6 7 6 7 9 5 6 6 6 6 6 7 9 3 8 6 6 0 5 6 0 0 3 0 0 8 6 6 6 6 6 6 9 3 6 6 6 4 6 8 6 5 5 5 8 6 8 6 6 8 8 6 9 0 5 5 9 6 6 6 8 4 0 6 7 6 5 6 7 6 4 8 6 6 0 2 11 5 8 5 6 4 6 0 0 7 6 8 5 0 6 8 6 6 6 6 9 6 0 6 6 5 6 6 0 6 6 6 6 6 6 6 0 0 0 8 8 6 0 9 9 6 6 5 4 6 6 4 7 5 6 4 7 6 6 4 6 5 7 0 3 8 5 0 6 6 6 8 6 0 6 9 6 8 5 4 0 5 7 3 5 7 5 7 6 6 5 5 7 5 6 0 6 9 6 5 6 6 6 9 6 7 6 4 5 6 4 8 6 0 0 6 5 8 6 4 5 8 2 4 5 3 6 6 4 6 0 0 0 5 9 6 4 0 6 5 6 6 5 0 9 6 6 0 6 5 8 6 6 8 4 0 6 3 0 0 6 6 6 7 5 5 3 8 6 6 6 0 7 5 8 6 6 4 5 6 6 5 9 5 0 5 6 4 3 2 6 6 6 0 6 8 5 9 0 8 8 4 6 0 5 6 0 5 0 0 9 6 7 5 6 6 0 7 0 5 9 7 5 9 5 6 6 6 5 9 6 6 9 6 9 6 6 0 5 6 4 4 6 6 5 5 6 6 5 3 3 4 5 4 3 3 3 3 5 6 4 5 4 6 9 9 0 9 3 7 3 3 6 6 8 0 6 6 6 6 8 6 6 6 5 8 0 0 6 3 0 8 8 9 6 9 6 6 9 9 5 5 0 5 5 4 6 7 6 6 7 6 0 6 5 6 0 8 9 6 9 4 6 6 6 6 4 6 6 6 4 6 8 6 10 8 4 4 4 0 8 6 6 8 0 5 6 6 6 6 5 6 6 8 6 6 6 0 5 6 6 5 6 6 8 5 6 6 5 6 0 9 9 0 0 6 6 0 0 6 6 6 2 5 6 6 6 6 6 6 9 4 0 6 5 0 0 0 7 3 6 8 4 5 8 8 6 6 8 6 8 6 6 4 6 5 4 6 9 0 6 6 6 6 6 6 6 5 2 6 4 6 7 6 0 4 6 4 2 0 0 6 6 7 6 6 5 0 0 8 6 0 0 0 6 8 9 7 5 0 8 3 6 6 9 3 6 4 6 8 6 6 3 8 6 0 6 5 5 0 4 8 6 6 6 8 7 4 0 6 9 9 9 6 4 6 6 8 6 5 8 6 8 9 9 6 6 6 8 6 5 6 6 6 5 0 8 6 8 6 0 6 5 8 5 7 6 6 0 0 5 9 6 8 6 6 4 8 0 8 6 6 0 7 8 0 6 0 0 7 6 0 6 0 6 0 0 6 0 0 0 7 6 6 6 8 6 3 6 6 0 0 6 6 6 6 0 6 6 6 9 6 6 8 6 6 6 6 0 0 8 9 0 4 6 0 4 5 0 0 6 0 7 7 5 6 8 7 0 8 6 6 7 0 8 6 0 0 6 6 5 6 6 6 6 9 9 8 0 6 5 6 6 6 4 0 4 6 3 6 6 6 6 5 5 6 6 8 0 0 5 6 6 0 6 0 6 0 0 0 10 5 0 0 4 5 5 8 6 6 6 6 6 6 6 6 0 7 6 6 3 5 6 2 6 4 0 0 0 7 5 6 6 7 0 0 0 0 6 8 6 8 5 0 6 0 0 0 9 0 0 0 8 0 6 8 5 7 5 0 6 6 8 0 6 7 0 0 8 0 8 0 0 0 9 6 6 8 8 6 6 0 0 6 0 6 0 0 0 6 6 8 6 6 6 10 9 6 0 0 6 6 0 6 5 4 3 0 0 4 6 6 5 4 6 7 5 3 6 6 4 6 5 4 5 5 3 3 6 6 6 0 9 9 3 3 8 6 6 6 0 5 6 6 6 5 6 8 6 5 6 7 6 6 9 6 6 0 6 2 0 4 5 8 5 6 4 3 0 7 6 5 4 0 6 6 2 6 6 9 8 6 6 4 6 6 6 6 6 0 0 6 6 7 5 9 7 5 8 4 9 6 6 7 6 0 0 8 6 6 6 6 4 8 6 5 9 4
16_0_0_0_1_0_0_0_0_0 9 6 0 0 0 4 9 6 5 8 0 0 6 6 6 8 0 6 8 0 0 6 6 4 8 0 6 0 6 5 6 6 0 5 7 6 6 6 6 8 9 6 6 0 6 6 8 6 6 6 8 8 0 6 9 0 6 0 6 6 7 4 0 6 5 0 4 4 5 5 0 5 5 0 8 5 0 0 7 4 6 5 5 5 6 5 0 0 6 6 6 6 9 7 7 6 5 9 8 0 6 6 3 0 4 6 0 6 0 5 0 6 3 8 6 5 4 6 0 8 8 0 6 8 0 5 6 6 6 6 6 6 6 9 6 5 4 9 5 6 0 5 6 6 0 5 0 6 9 6 6 0 7 0 4 10 0 5 6 9 9 0 6 8 6 6 0 0 8 8 7 0 6 6 8 6 9 6 6 0 0 8 5 6 9 6 5 0 6 8 6 5 8 7 0 6 8 5 6 5 7 7 7 5 5 5 5 6 8 0 0 8 8 6 6 5 5 9 9 8 6 6 6 8 6 8 9 6 0 5 0 0 6 9 6 6 6 6 0 6 9 6 5 6 6 5 5 6 6 6 6 5 5 6 6 5 7 6 0 0 0 9 7 0 0 0 0 6 6 6 5 6 0 0 6 0 0 6 8 6 0 6 9 6 6 8 0 6 5 0 6 5 6 0 9 6 0 6 5 6 5 6 0 0 6 9 6 6 9 0 6 6 0 8 0 8 9 6 10 6 9 8 5 6 5 6 0 7 6 6 5 6 0 5 4 4 0 8 9 6 0 0 6 5 5 6 6 0 6 6 9 5 6 8 6 8 5 0 6 5 4 4 0 0 5 5 3 8 6 6 6 5 0 0 4 0 0 5 7 0 6 6 5 2 8 6 6 0 4 8 3 4 3 8 5 5 3 5 6 6 6 6 6 6 6 0 5 9 9 9 6 5 4 6 6 8 8 8 6 0 7 4 5 5 3 0 6 6 8 4 6 7 5 6 6 6 5 6 6 7 4 6 5 6 5 6 6 5 7 8 8 6 6 7 4 5 5 9 0 9 6 6 5 8 6 5 8 6 5 6 5 8 8 0 9 6 7 0 8 5 6 0 5 7 8 0 7 6 6 6 3 5 8 5 4 6 6 6 6 6 8 5 5 5 8 6 5 6 7 9 5 6 6 0 6 7 0 6 2 6 7 6 6 5 6 9 6 4 0 7 4 0 8 6 6 0 0 5 0 9 6 7 6 6 6 6 4 9 5 6 6 4 6 4 5 0 6 5 6 8 9 5 6 8 0 6 5 5 5 6 7 7 6 4 6 6 0 6 6 0 6 6 6 4 6 3 6 8 5 6 3 6 6 7 6 7 9 5 6 6 6 6 6 7 9 3 8 6 6 0 5 6 0 0 3 0 0 8 6 6 6 6 6 6 9 3 6 6 6 4 6 8 6 5 5 5 8 6 8 6 6 8 8 6 9 0 5 5 9 6 6 6 8 4 0 6 7 6 5 6 7 6 4 8 6 6 0 0 11 5 8 5 6 4 6 0 0 7 6 8 5 0 6 0 6 6 6 6 9 6 0 6 6 5 6 6 0 6 6 6 6 6 6 6 0 0 0 8 8 6 0 9 9 6 6 5 4 6 6 4 7 5 6 4 7 6 6 4 6 5 7 0 3 8 5 0 0 6 6 8 6 6 6 9 6 8 5 4 0 5 7 3 5 7 5 6 6 6 5 5 7 5 6 0 6 9 6 5 6 6 6 9 6 7 6 4 5 6 4 8 6 0 0 6 5 8 6 4 5 8 2 4 5 3 6 6 4 6 0 0 0 5 9 6 4 0 6 5 6 6 5 0 9 6 6 0 6 5 8 6 6 8 4 0 6 3 0 0 6 6 6 7 5 5 3 8 6 6 6 0 7 5 8 6 6 4 5 6 6 5 9 5 0 5 6 4 3 2 6 6 6 0 6 8 5 9 0 8 8 4 6 0 5 6 0 5 0 0 9 6 7 5 6 6 0 7 0 5 9 7 5 9 5 6 6 6 5 9 6 6 9 6 9 6 6 0 5 6 4 4 6 6 5 5 6 6 5 3 3 4 5 4 3 3 3 3 5 6 4 5 4 6 9 9 0 9 3 7 3 3 6 6 8 0 6 6 6 6 8 6 6 6 5 8 0 0 6 3 0 8 8 9 6 0 6 6 9 9 5 5 0 5 5 4 6 7 6 6 7 6 0 5 5 6 0 8 9 6 9 4 6 6 6 6 4 6 6 6 4 6 8 6 10 8 4 4 4 0 8 6 6 8 0 5 6 6 6 6 5 6 6 8 6 6 6 0 5 6 6 5 6 6 8 5 6 10 5 6 0 8 9 0 0 0 6 0 0 6 6 6 2 5 6 6 6 6 6 6 9 4 0 6 5 0 0 0 7 3 6 8 4 5 8 8 6 6 8 6 8 6 6 4 6 5 4 6 9 0 6 6 6 6 6 6 6 5 2 6 4 6 7 6 0 4 6 4 2 0 0 6 6 7 6 6 5 0 0 8 6 0 0 0 6 8 9 7 5 0 8 0 6 6 9 3 6 4 6 8 6 6 3 8 6 0 6 5 5 0 4 8 6 6 6 8 7 4 0 6 9 9 9 6 4 10 6 8 6 5 8 6 8 0 9 6 6 6 8 6 5 6 6 6 5 0 8 6 8 6 0 6 5 8 5 7 6 6 0 0 5 9 6 8 6 6 4 8 0 8 6 6 0 7 8 0 6 0 0 7 6 0 6 0 6 0 0 6 0 0 0 7 6 6 6 8 6 3 6 6 0 0 6 6 6 6 0 6 6 6 9 6 6 8 6 6 6 6 0 0 8 9 0 4 0 0 4 5 0 0 6 0 7 7 5 6 8 7 0 8 6 6 7 0 8 6 0 0 6 6 5 6 6 6 6 9 9 8 0 6 5 6 6 6 4 0 4 6 3 6 6 6 6 5 5 6 6 8 0 0 5 6 6 0 6 0 6 0 0 0 10 5 0 0 4 5 5 8 6 6 6 6 6 6 6 6 0 7 6 6 3 5 6 2 6 4 0 0 0 7 5 6 6 0 0 0 0 0 6 8 6 8 5 0 6 0 0 0 9 0 0 0 8 0 6 8 5 7 5 0 6 6 8 0 6 7 0 0 8 0 8 0 0 0 9 6 6 8 8 6 6 0 0 6 0 6 0 0 0 6 6 8 6 6 6 10 9 6 0 0 6 6 0 6 5 4 3 0 0 4 6 6 5 4 6 7 5 3 6 6 4 6 5 4 5 5 3 3 6 6 6 0 9 9 3 3 8 6 6 6 0 5 6 6 6 0 6 8 6 5 6 7 6 6 9 6 6 0 6 2 0 4 5 8 5 6 4 3 0 7 6 5 4 0 6 6 2 6 6 9 8 6 6 4 6 6 6 6 6 0 0 6 6 7 5 9 7 5 8 4 9 6 6 7 6 0 0 8 6 6 6 6 4 8 6 5 9 4
17_0_0_0_0_0_0_0_0_0 21 25 0 0 0 20 29 18 5 20 0 0 18 25 19 22 0 18 8 0 0 19 28 4 19 0 16 0 20 24 19 21 0 20 19 28 19 27 20 24 24 21 26 0 22 17 23 18 15 15 17 27 0 20 21 0 21 0 23 26 20 18 0 25 25 0 15 4 15 24 0 17 19 0 16 22 0 0 20 23 27 20 5 16 23 19 0 0 18 19 28 23 27 21 19 22 17 26 20 0 26 26 3 0 21 26 0 18 0 15 0 22 12 28 19 17 24 19 0 22 25 0 20 26 0 19 23 19 27 19 27 20 20 22 25 21 16 22 19 20 0 13 24 21 0 20 0 20 22 20 21 16 18 22 16 21 0 11 24 25 23 0 13 27 26 24 0 0 17 26 21 0 20 19 25 19 25 17 18 0 0 24 25 21 21 30 20 0 17 8 23 5 20 24 0 21 14 16 21 17 14 7 27 18 18 11 22 17 19 0 0 20 23 26 19 17 18 20 24 23 17 25 26 20 18 17 24 25 0 17 0 0 20 26 27 20 19 16 0 23 9 6 15 31 17 19 18 23 12 19 17 18 16 18 18 5 25 17 0 0 19 22 20 18 0 0 0 18 17 27 20 18 0 0 19 0 0 21 18 22 0 19 27 23 20 20 0 19 5 0 25 24 20 0 25 19 0 18 23 29 14 6 25 0 23 20 16 21 9 0 21 20 19 15 0 26 27 27 21 26 20 15 22 25 24 13 0 19 26 15 15 27 0 20 4 12 0 0 20 23 0 0 17 23 21 18 6 0 28 24 20 20 25 19 19 18 21 19 26 5 10 22 0 0 19 17 16 29 19 23 18 18 0 0 4 0 0 18 14 0 16 22 22 2 24 17 17 0 12 19 15 24 13 27 20 5 12 17 24 21 22 19 27 18 29 18 20 25 23 20 25 25 15 18 19 15 17 14 14 0 15 20 17 19 17 0 26 16 14 15 26 22 14 20 20 19 24 27 24 28 20 24 21 19 19 21 25 16 15 20 18 18 18 18 0 15 15 24 0 26 19 21 16 21 25 5 23 26 26 18 15 0 17 0 18 21 27 0 0 16 23 0 18 18 0 0 21 21 23 23 3 14 18 28 23 25 19 18 25 25 25 18 5 18 8 6 24 6 20 22 25 6 18 0 26 27 0 20 10 20 25 21 19 15 13 28 27 18 0 23 13 0 0 20 17 0 0 17 0 9 19 17 19 26 25 29 17 21 24 23 26 21 24 18 27 0 28 17 16 21 21 20 21 17 0 6 5 16 21 6 21 22 26 10 19 23 0 21 23 22 25 24 22 15 29 14 28 28 23 22 20 27 17 15 13 23 20 5 17 6 21 17 28 23 30 15 19 16 24 0 26 17 0 0 3 0 0 26 23 22 23 24 19 6 26 14 24 26 20 13 23 16 22 23 25 21 16 18 18 28 24 19 22 20 22 0 16 5 26 6 18 17 23 15 0 20 21 19 17 6 23 25 24 26 21 22 0 9 30 18 18 17 18 16 21 0 0 14 21 15 18 0 24 25 22 28 28 19 19 19 0 27 19 14 22 19 0 23 25 26 24 22 16 25 0 0 0 0 0 28 0 25 21 26 17 25 4 6 6 4 23 5 20 17 20 23 14 16 18 20 24 0 15 19 18 0 28 26 26 22 17 25 19 25 18 27 17 4 0 15 16 10 27 26 5 27 18 22 18 18 16 21 18 0 21 21 27 18 21 22 27 28 19 24 19 17 18 18 20 19 25 0 0 6 15 16 20 14 21 24 2 4 22 3 15 22 4 23 0 0 0 17 25 20 15 0 19 13 24 23 18 0 20 26 23 0 21 5 19 16 19 18 15 0 18 3 0 0 23 20 20 24 16 5 12 19 18 18 26 0 25 16 18 22 24 17 5 6 19 23 9 18 0 24 18 11 8 11 16 25 27 0 18 19 16 16 0 23 19 15 18 0 21 19 0 15 0 0 19 27 21 22 24 26 0 17 0 5 27 24 18 19 21 25 19 17 15 18 24 25 29 19 21 26 6 0 21 27 4 4 24 24 24 16 18 24 18 3 3 4 20 17 3 3 3 3 5 6 15 17 4 19 28 0 0 23 3 27 3 3 25 21 19 0 18 20 18 19 19 19 29 19 16 20 0 0 18 13 0 16 18 27 15 24 18 15 16 22 17 24 0 5 5 4 6 21 19 24 25 6 0 0 15 16 0 19 29 21 25 23 27 24 23 27 13 17 6 20 15 29 18 25 28 16 13 15 18 0 26 21 17 20 0 15 23 17 20 25 22 27 20 20 21 21 28 0 16 19 26 5 25 21 27 18 29 21 17 19 0 29 29 0 0 29 13 0 0 18 6 18 2 13 23 29 27 24 19 26 26 18 0 25 23 0 0 0 16 3 19 25 4 13 16 23 27 22 19 28 27 20 17 14 20 5 11 19 23 0 28 26 19 27 20 26 18 14 15 22 16 18 22 24 0 17 20 18 6 0 0 20 27 19 17 19 20 0 0 18 24 0 0 0 17 22 27 28 17 0 26 15 6 28 19 13 21 24 27 8 6 23 17 18 23 0 18 17 17 0 22 17 23 17 25 22 25 19 0 18 21 19 0 16 14 20 20 20 22 19 8 28 27 20 26 23 24 6 23 23 16 20 19 20 15 0 26 23 18 25 0 24 5 19 5 24 19 20 0 0 18 25 18 18 28 23 11 0 0 26 27 24 0 7 19 0 18 0 0 19 20 0 21 0 27 0 0 0 0 0 0 21 19 16 23 27 19 10 21 26 0 0 21 22 16 18 0 19 19 20 26 19 26 18 28 19 6 21 0 0 20 27 0 16 26 0 4 16 0 0 21 0 24 14 19 12 17 23 0 24 26 17 23 0 25 28 0 0 29 20 12 19 17 20 23 28 20 18 0 27 14 19 0 6 13 0 10 20 22 27 23 25 26 14 18 27 20 27 0 0 18 21 20 0 20 0 23 0 0 0 22 19 0 0 4 16 5 17 22 25 20 25 15 22 17 18 0 28 6 19 13 22 19 2 18 14 0 0 0 24 17 21 20 24 0 0 0 0 6 17 0 26 19 0 19 0 0 0 21 0 0 0 21 0 20 18 18 15 15 0 25 16 23 0 13 17 0 0 18 0 18 0 0 0 27 20 25 18 0 18 17 0 0 25 0 27 0 0 0 28 19 18 19 24 18 20 22 27 0 0 19 20 0 19 20 13 3 0 0 13 19 18 13 12 6 15 23 13 17 23 17 26 18 18 21 13 3 3 19 20 25 0 28 9 13 11 26 18 20 6 0 25 25 20 20 18 20 18 16 5 18 19 27 6 21 25 21 0 19 14 0 4 24 27 25 19 15 23 0 19 27 20 24 0 26 25 2 6 18 20 20 24 19 21 21 16 17 19 27 0 0 20 21 25 0 25 16 25 20 17 18 21 19 21 19 0 0 20 29 26 16 28 10 17 26 17 27 21- .txt file :
id isolate [ 10. 20. 50. 80. 99.68 99.74 99.81 99.87 99.94 100. ]
52 CSID_3000515960 0_0_0_0_0_0_0_0_0_0
54 CSID_3000516026 0_0_0_0_0_0_0_0_0_0
...
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22 SRR3240397 0_0_0_0_0_0_0_0_0_0Update DataBase LIN :
python LINcode.py -i BIGSdb_eliza_update.txt -r BIGSdb_eliza.lin -t 1-2 -l 3-- Create DataBase LIN + prefix tree without length of branches (newick) :
python LINcode.py -i BIGSdb_eliza.txt -t 1-2 -l 3- -b 10,20,50,80,99.68,99.74,99.81,99.87,99.94,100 -tree Y - Create DataBase LIN + prefix tree with length of branches (newick) :
python LINcode.py -i BIGSdb_eliza.txt -t 1-2 -l 3- -b 10,20,50,80,99.68,99.74,99.81,99.87,99.94,100 -tree Y -lg Y Output files
- Output
| Name | content |
|---|---|
| BIGSdb_eliza.lin | LIN Database |
| LIN_BIGSdb_eliza.txt | LIN Isolates List |
- Option (-tree or -lg)
| Name | content |
|---|---|
| ARBRE_REF.txt | tree with length of branches |
| Arbres.txt | tree without length of branches |