From fe31850c5df6b6eaef837b1c46059a398c88b057 Mon Sep 17 00:00:00 2001 From: mrethore <martin.rethoret-pasty@pasteur.fr> Date: Tue, 20 Aug 2024 12:06:53 +0200 Subject: [PATCH] Referencing genes with family deleted in 'VIRULENCE_Corynebacterium' --- data/resistance/Corynebacterium_diphtheriae/fam_Cd.tab | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/data/resistance/Corynebacterium_diphtheriae/fam_Cd.tab b/data/resistance/Corynebacterium_diphtheriae/fam_Cd.tab index 34187dc..27b6ba1 100644 --- a/data/resistance/Corynebacterium_diphtheriae/fam_Cd.tab +++ b/data/resistance/Corynebacterium_diphtheriae/fam_Cd.tab @@ -12,11 +12,11 @@ narH MOLECULAR_NITRATE narH - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 1 MOLECULAR_BIOV narG MOLECULAR_NITRATE narG - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 1 MOLECULAR_BIOVAR MOLECULAR_BIOVAR narG narG Corynebacterium diphtheriae nitrate reductase subunit alpha narG narK MOLECULAR_NITRATE narK - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 1 MOLECULAR_BIOVAR MOLECULAR_BIOVAR narIJHK narIJHK Corynebacterium diphtheriae MFS transporter narK VIRULENCE_Corynebacterium VIRULENCE - - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 0 VIRULENCE VIRULENCE -tox_pseudotuberculosis tox tox_pseudotuberculosis - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium pseudotuberculosis diphtheria toxin precursor tox -tox_ulcerans tox tox_ulcerans - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium ulcerans diphtheria toxin precursor tox -tox_diphtheriae tox tox_diphtheriae - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium diphtheriae diphtheria toxin precursor tox -pld_pseudotuberculosis pld pld_pseudotuberculosis - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE OTHER_TOXINS OTHER_TOXINS Corynebacterium pseudotuberculosis Phospholipase D -pld_ulcerans pld pld_ulcerans - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE OTHER_TOXINS OTHER_TOXINS Corynebacterium ulcerans Phospholipase D +tox_pseudotuberculosis VIRULENCE_Corynebacterium tox_pseudotuberculosis - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium pseudotuberculosis diphtheria toxin precursor tox +tox_ulcerans VIRULENCE_Corynebacterium tox_ulcerans - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium ulcerans diphtheria toxin precursor tox +tox_diphtheriae VIRULENCE_Corynebacterium tox_diphtheriae - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium diphtheriae diphtheria toxin precursor tox +pld_pseudotuberculosis VIRULENCE_Corynebacterium pld_pseudotuberculosis - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE OTHER_TOXINS OTHER_TOXINS Corynebacterium pseudotuberculosis Phospholipase D +pld_ulcerans VIRULENCE_Corynebacterium pld_ulcerans - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE OTHER_TOXINS OTHER_TOXINS Corynebacterium ulcerans Phospholipase D rbp VIRULENCE_Corynebacterium rbp - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE OTHER_TOXINS OTHER_TOXINS Putative ribosome binding protein rbp-like VIRULENCE_Corynebacterium rbp-like - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE OTHER_TOXINS OTHER_TOXINS Ribosome binding protein like REGULATOR ALL - - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 0 REGULATOR REGULATOR -- GitLab