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Mise à jour de Alleles of the diphtheria toxin gene authored by Mélanie HENNART's avatar Mélanie HENNART
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Alleles-of-the-diphtheria-toxin-gene.md
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_diphtOscan_ identifies the alleles of the _tox_ gene in case of presence of the gene in the genomes. The source of allele nomenclature is the [BIGSdb-Pasteur _C. diphtheriae_ database](https://bigsdb.pasteur.fr/diphtheria/).
A copy of the _tox_ alleles definitions is stored in the [data directory](https://gitlab.pasteur.fr/BEBP/diphtoscan/data) of this repository. The update can be executed with the `-u` option.
A copy of the _tox_ alleles definitions is stored in the [data directory](https://gitlab.pasteur.fr/BEBP/diphtoscan/-/tree/main/data/tox) of this repository. The update can be executed with the `-u` option.
## _diphtOscan_ output: "tox_allele" column
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