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Mise à jour de Alleles of the diphtheria toxin gene authored by Mélanie HENNART's avatar Mélanie HENNART
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Alleles-of-the-diphtheria-toxin-gene.md
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...@@ -18,11 +18,11 @@ A copy of the _tox_ alleles definitions is stored in the [data directory](https: ...@@ -18,11 +18,11 @@ A copy of the _tox_ alleles definitions is stored in the [data directory](https:
| strain | tox_allele | TOXIN | Interpretation | | strain | tox_allele | TOXIN | Interpretation |
| ---------- | ------------ | --------------------------------- | ----------------------------------------- | | ---------- | ------------ | --------------------------------- | ----------------------------------------- |
| strain A | - | - | the tox gene is absent or less than 50% of its length is detected | | strain A | - | - | the _tox_ gene is absent or less than 50% of its length is detected |
| strain B | 1 | tox_diphtheriae | Exact match compared to the _C. diphtheriae_ tox reference | | strain B | 1 | tox_diphtheriae | Exact match compared to the _C. diphtheriae_ tox reference |
| strain C | 10 | tox_diphtheriae* | Inexact match compared to the reference | | strain C | 10 | tox_diphtheriae* | Inexact match compared to the reference |
| strain D | 2 | tox_diphtheriae;tox_diphtheriae | two copies of tox | | strain D | 2 | tox_diphtheriae;tox_diphtheriae | two copies of _tox_ |
| strain E | 38* | tox_diphtheriae-NTTB?$-20% | tox is truncated by 20% and is located at the end of a contig | | strain E | 38* | tox_diphtheriae-NTTB?$-20% | _tox_ is truncated by 20% and is located at the end of a contig |
| strain F | 24 | tox_diphtheriae-NTTB?-14% | Tox is truncated by 14% | | strain F | 24 | tox_diphtheriae-NTTB?-14% | _tox_ is truncated by 14% |
| strain G | 6* | tox_ulcerans | Exact match compared to the reference of _C. ulcerans_ | | strain G | 6* | tox_ulcerans | Exact match compared to the _C. ulcerans_ tox reference |