|
|
|
_diphtOscan_ is a tool to screen genome assemblies of _Corynebacterium diphtheriae_ and the _Corynebacterium diphtheriae_ species complex (Cdc) for:
|
|
|
|
* MLST sequence type
|
|
|
|
* species (e.g. K. pneumoniae, K. quasipneumoniae, K. variicola, etc.)
|
|
|
|
* virulence factors
|
|
|
|
* antimicrobial resistance determinants: acquired genes and SNPs
|
|
|
|
* typing _tox_ gene
|
|
|
|
* get genomic context |
|
|
\ No newline at end of file |
