From 001c9e4e5166e3a894ac1ef3502bd8c29d7a6ce4 Mon Sep 17 00:00:00 2001
From: Alexis  CRISCUOLO <alexis.criscuolo@pasteur.fr>
Date: Thu, 15 Jun 2023 08:50:36 +0200
Subject: [PATCH] 0.1

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 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

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 # AlienDiscover
 
 
-_AlienDiscover_ is a command line program written in [Java](https://docs.oracle.com/en/java/) that quickly infer 3' alien oligonucleotide sequence(s) (e.g. adapters, primers, ...) from ([Illumina](https://www.illumina.com/)) short high-thoughput sequencing (HTS) reads, without any prior knowledge. _AlienDiscover_ is an alternative to the tool _Minion_ from the _Kraken_ suite ([Davis et al. 2013](https://doi.org/10.1016/j.ymeth.2013.06.027)).
+_AlienDiscover_ is a command line program written in [Java](https://docs.oracle.com/en/java/) that quickly infer 3' alien oligonucleotide sequence(s) (e.g. adapters, primers, ...) from ([Illumina](https://www.illumina.com/)) short high-thoughput sequencing (HTS) reads, without any prior knowledge. _AlienDiscover_ is an alternative to the tool _Minion_ from the _Kraken_ suite ([Davis et al. 2013](https://doi.org/10.1016/j.ymeth.2013.06.027)). Inferred alien oligonucleotide sequence(s) can next be clipped using e.g. [AlienTrimmer](https://gitlab.pasteur.fr/GIPhy/AlienTrimmer).
 
 
 ## Installation
-- 
GitLab