From 9d4704426d7993b78cfc97a53be835415fd520c5 Mon Sep 17 00:00:00 2001
From: Alexis CRISCUOLO <criscuol@pasteur.fr>
Date: Mon, 20 Feb 2023 17:34:44 +0100
Subject: [PATCH] 1.5
---
GenoLayout.sh | 15 +++++++++------
1 file changed, 9 insertions(+), 6 deletions(-)
diff --git a/GenoLayout.sh b/GenoLayout.sh
index 2dba052..aac0a30 100755
--- a/GenoLayout.sh
+++ b/GenoLayout.sh
@@ -4,7 +4,7 @@
# #
# GenoLayout: linear maps (showing conserved orthologous fragments) between genomes #
# #
- COPYRIGHT="Copyright (C) 2022 Institut Pasteur" #
+ COPYRIGHT="Copyright (C) 2022,2023 Institut Pasteur" #
# #
# This program is free software: you can redistribute it and/or modify it under the terms of the GNU #
# General Public License as published by the Free Software Foundation, either version 3 of the License, or #
@@ -32,7 +32,10 @@
# = VERSIONS = #
# ============ #
# #
- VERSION=1.4.220405ac #
+ VERSION=1.5.230220ac #
+# + updating finalizers for BLAST+ version >= 2.13.0 #
+# #
+# VERSION=1.4.220405ac #
# + GSCALE is computed to always obtain SVG files of fixed width 5000 px #
# #
# VERSION=1.3.220307ac #
@@ -302,8 +305,8 @@ INFO2=$(randfile $OUTFILE.info2);
## defining traps ############################################################################################
finalizer() {
- rm -f $FRAG1 $FRAG1.ndb $FRAG1.nhr $FRAG1.nin $FRAG1.not $FRAG1.nsq $FRAG1.ntf $FRAG1.nto ;
- rm -f $FRAG2 $FRAG2.ndb $FRAG2.nhr $FRAG2.nin $FRAG2.not $FRAG2.nsq $FRAG2.ntf $FRAG2.nto ;
+ rm -f $FRAG1 $FRAG1.ndb $FRAG1.nhr $FRAG1.nin $FRAG1.njs $FRAG1.not $FRAG1.nsq $FRAG1.ntf $FRAG1.nto ;
+ rm -f $FRAG2 $FRAG2.ndb $FRAG2.nhr $FRAG2.nin $FRAG2.njs $FRAG2.not $FRAG2.nsq $FRAG2.ntf $FRAG2.nto ;
rm -f $OUT1 $OUT2 $TMP1 $TMP2 $INFO1 $INFO2;
}
echoxit() {
@@ -441,8 +444,8 @@ do
echo " [ok]" >&2 ;
- rm -f $FRAG1.ndb $FRAG1.nhr $FRAG1.nin $FRAG1.not $FRAG1.nsq $FRAG1.ntf $FRAG1.nto ;
- rm -f $FRAG2.ndb $FRAG2.nhr $FRAG2.nin $FRAG2.not $FRAG2.nsq $FRAG2.ntf $FRAG2.nto ;
+ rm -f $FRAG1.ndb $FRAG1.nhr $FRAG1.nin $FRAG1.njs $FRAG1.not $FRAG1.nsq $FRAG1.ntf $FRAG1.nto ;
+ rm -f $FRAG2.ndb $FRAG2.nhr $FRAG2.nin $FRAG2.njs $FRAG2.not $FRAG2.nsq $FRAG2.ntf $FRAG2.nto ;
done
rm -f $FRAG1 $FRAG2 ;
--
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