From 8d995a81c972c7c78a1075e9dc90fb8033e9b7dc Mon Sep 17 00:00:00 2001 From: Alexis CRISCUOLO <alexis.criscuolo@pasteur.fr> Date: Wed, 27 May 2020 09:44:34 +0200 Subject: [PATCH] 0.1 --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 91f426a..35ec151 100644 --- a/README.md +++ b/README.md @@ -168,7 +168,7 @@ nAUC aWallace2 0.999118 [0.996141 , 1.000000] The clustering based on the cutoff 0.007 seems robust to data subsampling, as the three estimated nAUC are quite high (e.g. > 0.75). However, the same clustering seems less robust to data perturbation, as the 2.5% CI are quite small for the silhouette and the first Wallace coefficient, e.g. < 0.4. -**Searching optimal clustering** +**Searching for optimal clustering** An optimal MST-based clustering can be defined by the cutoff value that maximizes the different estimated statistics. By considering every branch length from the minimum spanning tree in _data.graphml_ (see above) as a putative cutoff, _MSTclust_ can be used to display in standard output these statistics in a convenient tab-delimited format (option `-t`): -- GitLab