diff --git a/Snakefile b/Snakefile index ba663d765f6809bc7c8c4ec262efc4e033d09c04..e1c005d500b0d30b1705906d469a954dc5964cd9 100644 --- a/Snakefile +++ b/Snakefile @@ -8,7 +8,9 @@ rule combine_tables: output: table="{folder}/final_table.csv", swarm_plot="{folder}/swarm_plot.png", - prob_plot="{folder}/prob_plot.png" + swarm_plot_int="{folder}/swarm_plot_intensities.png", + prob_plot="{folder}/prob_plot.png", + prob_plot_log="{folder}/prob_plot_log.png" shell: "python merge_tables.py {input.table1} {input.table2} {output.table} {output.swarm_plot} {output.prob_plot} {params.threshold}"