From 778089088af1bfbcfd363e6cd792d5bf305be101 Mon Sep 17 00:00:00 2001
From: Andrey Aristov <aaristov@pasteur.fr>
Date: Thu, 2 Jun 2022 16:42:58 +0200
Subject: [PATCH] merge intensity
---
merge_tables.py | 2 ++
1 file changed, 2 insertions(+)
diff --git a/merge_tables.py b/merge_tables.py
index d5eefd9..5176a15 100644
--- a/merge_tables.py
+++ b/merge_tables.py
@@ -7,6 +7,8 @@ import matplotlib.pyplot as plt
def combine(table_day1_path, table_day2_path, table_output_path, swarmplot_output_path, prob_plot_path, threshold:int=20):
day1, day2 = [pd.read_csv(t) for t in [table_day1_path, table_day2_path]]
day1.loc[:,'n_cells_final'] = day2.n_cells
+ day1.loc[:,'intensity_final'] = day2.intensity
+
day1.loc[:,'final_state'] = day1.n_cells_final > threshold
day1.to_csv(table_output_path, index=None)
--
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