diff --git a/align.py b/align.py index ba2272aa94fdfbb4652ca26a98f57eccfeddf669..294133c445888f75eca4a9a61530ab665e480da0 100644 --- a/align.py +++ b/align.py @@ -32,7 +32,7 @@ def align_multichip( rotation_data_deg = int(concentrations_dct["rotation_data_deg"]) print(f'Rotation: {rotation_data_deg}') else: - rotate_template_deg = 0 + rotation_data_deg = 0 print('concentrations: ', concentrations) unit = concentrations_dct['units'] tif_paths = [f'{os.path.dirname(BF_TRITC_2D_path)}/{c:02d}{unit}_aligned.tif' for c in concentrations]