diff --git a/src/napari_segment/_reader.py b/src/napari_segment/_reader.py
index cb88a94b8fac8dd3761e9796b3e09be39b17a2f8..bb844133e4e86eaaee3d01ee2b7e8951d5d79ee2 100644
--- a/src/napari_segment/_reader.py
+++ b/src/napari_segment/_reader.py
@@ -48,16 +48,23 @@ def napari_get_reader(path):
def read_zarr(path):
- print(f"reading {path}")
+ print(f"read_zarr {path}")
+
try:
attrs = json.load(open(os.path.join(path, ".zattrs")))
info = attrs["multiscales"]["multiscales"][0]
+ except Exception as e:
+ raise e
+
+ dataset_paths = [os.path.join(path, d["path"]) for d in info["datasets"]]
+ datasets = [dask.array.from_zarr(p) for p in dataset_paths]
+
+ try:
channel_axis = info["channel_axis"]
print(f"found channel axis {channel_axis}")
- dataset_paths = [
- os.path.join(path, d["path"]) for d in info["datasets"]
- ]
- datasets = [dask.array.from_zarr(p) for p in dataset_paths]
+ except KeyError:
+ channel_axis = None
+
except Exception as e:
raise e