diff --git a/src/droplet_growth/register.py b/src/droplet_growth/register.py index 6d2d927b4468838b5db6c7e2af393c9f93a3c45e..bc36ead976878f8523dba8b844b7a8d0bf1613f4 100644 --- a/src/droplet_growth/register.py +++ b/src/droplet_growth/register.py @@ -55,7 +55,7 @@ def align_stack(data_or_path, template16, mask2, plot=False, path_to_save=None, stack_mask_scale = binnings[2] // binnings[0] f_bf = bf[::stack_temp_scale, ::stack_temp_scale] - + f_bf_sm = ndi.gaussian_filter(f_bf, 2) # f_bf = filter_by_fft( # bf[::stack_temp_scale, ::stack_temp_scale], # sigma=40, @@ -63,7 +63,7 @@ def align_stack(data_or_path, template16, mask2, plot=False, path_to_save=None, # fix_vertical_stripes=True, # highpass=True # ) - tvec8 = get_transform(f_bf, template16, plot=plot) + tvec8 = get_transform(f_bf_sm, template16, plot=plot) plt.show() tvec = scale_tvec(tvec8, mask_temp_scale) print(tvec)