Commit 96eba4a1 authored by Andrey  ARISTOV's avatar Andrey ARISTOV
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Add installation instructions

parent 705f46ab
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# nd2 to tif conversion tools
## Installation
1. Download and install [miniconda3](https://docs.conda.io/en/latest/miniconda.html)
2. Create new environment with python 3.8
- `conda create -n nd2 python=3.8`
- `conda activate nd2`
3. Install the package `pip install -U git+https://gitlab.pasteur.fr/aaristov/nd2shrink.git`
## Compress nd2 to tif with 4x binning and 16 to 8 bits conversion
### Use:
......@@ -10,7 +19,7 @@
### Use
`python -m nd2_combine folder`
`python -m nd2_combine path_to_folder`
#### Input:
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