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Amine GHOZLANE
shaman
Commits
b995a3a3
Commit
b995a3a3
authored
Feb 26, 2021
by
Amine GHOZLANE
Browse files
Add localhost message
parent
197e90f7
Pipeline
#48893
passed with stages
in 123 minutes and 13 seconds
Changes
3
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
.gitlab-ci.yml
View file @
b995a3a3
...
...
@@ -52,17 +52,17 @@ build_conda:
-
conda config --add channels conda-forge
-
conda config --add channels r
-
conda config --add channels aghozlane
-
conda config --set anaconda_upload
no
-
conda config --set anaconda_upload
yes
-
conda update conda
-
conda install -y conda-verify
-
conda install -y anaconda-client
-
conda install -y conda-build
-
conda install -y git
script
:
-
conda build conda_inst
-
res=$(conda build conda_inst --output --output-folder .)
-
anaconda login --username "$DOCKER_USER" --password "$DOCKER_PASS"
-
anaconda upload $res
-
conda build conda_inst
#- res=$(conda build conda_inst --output --output-folder .)
#- anaconda upload $res
except
:
-
dev
-
master
README.md
View file @
b995a3a3
...
...
@@ -35,12 +35,12 @@ Now in your terminal:
```
docker pull aghozlane/shaman && docker run --rm -p 80:80 -p 5438:5438 aghozlane/shaman
```
Then connect to http://0.0.0.0/ with your favorite web navigator.
Then connect to
http://localhost/ or
http://0.0.0.0/ with your favorite web navigator.
Failed: port is already allocated ?
```
docker run --rm -p 3838:80 -p 5438:5438 aghozlane/shaman
```
Then connect to http://0.0.0.0:3838/.
Then connect to
http://localhost:3838/ or
http://0.0.0.0:3838/.
Docker update after an update of SHAMAN:
```
docker pull aghozlane/shaman
...
...
@@ -58,7 +58,7 @@ Now you can run R:
```
install.packages("devtools")
devtools::install_github("rstudio/packrat")
packrat::unbundle("shaman_package_202
009
.tar.gz", "packrat/")
packrat::unbundle("shaman_package_202
102
.tar.gz", "packrat/")
packrat::init("packrat/shaman")
system("Rscript -e 'shiny::runGitHub("pierreLec/KronaRShy",port=5438)'",wait=FALSE),
shiny::runGitHub('aghozlane/shaman')
...
...
@@ -92,7 +92,7 @@ conda install -c aghozlane shaman
# Now run shaman
shaman_conda.R
```
Then connect to http://0.0.0.0/.
Then connect to
http://localhost/ or
http://0.0.0.0/.
## Citation
...
...
ui.R
View file @
b995a3a3
...
...
@@ -218,10 +218,10 @@ function(request) {
p
(
"Download and install docker from"
,
a
(
"https://www.docker.com/"
,
href
=
"https://www.docker.com/"
)),
p
(
"- Running SHAMAN:"
),
mainPanel
(
div
(
style
=
'max-width: 900px'
,
"docker pull aghozlane/shaman && docker run --rm -p 80:80 -p 5438:5438 aghozlane/shaman"
),
width
=
8
,
class
=
"mainwell"
),
p
(
"Then connect to http://0.0.0.0/ with your favorite web navigator."
),
p
(
"Then connect to
http://localhost/ or
http://0.0.0.0/
with your favorite web navigator."
),
p
(
"Failed: port is already allocated ?"
),
mainPanel
(
div
(
style
=
'max-width: 900px'
,
"docker run --rm -p 3838:80 -p 5438:5438 aghozlane/shaman"
),
width
=
6
,
class
=
"mainwell"
),
p
(
"Then connect to http://0.0.0.0:3838/."
),
p
(
"Then connect to
http://localhost:3838/
http://0.0.0.0:3838/."
),
p
(
"- Docker update after an update of SHAMAN:"
),
mainPanel
(
div
(
style
=
'max-width: 900px'
,
"docker pull aghozlane/shaman"
),
width
=
4
,
class
=
"mainwell"
)
),
...
...
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