Commits · master · Amine GHOZLANE / shaman

28 Oct, 2020 1 commit
- Update conda and docker install, better load .fq files · c51d126a
  Amine GHOZLANE authored Oct 28, 2020
  
  c51d126a
27 Aug, 2020 1 commit
- Debug one specie issue in boxplot and barplot · 02e7b2e0
  Amine GHOZLANE authored Aug 27, 2020
  
  02e7b2e0
26 Aug, 2020 1 commit
- Fix for rNVD3shaman for docker install · 1bf6d75f
  Amine GHOZLANE authored Aug 26, 2020
  
  1bf6d75f
25 Aug, 2020 1 commit
- Let's go for 100 percent of https · de23e039
  Amine GHOZLANE authored Aug 25, 2020
  
  de23e039
19 Aug, 2020 1 commit
- Add shaman publication · 98786eae
  Amine GHOZLANE authored Aug 19, 2020
  
  98786eae
24 Jul, 2020 1 commit
- Debug source version issue · e8f1811e
  Amine GHOZLANE authored Jul 24, 2020
  
  e8f1811e
23 Jul, 2020 1 commit
- Improved export for volcano plot, debug diversity confidence interval · 8f823aa5
  Amine GHOZLANE authored Jul 23, 2020
  
  8f823aa5
17 Jun, 2020 1 commit
- Add export of the tree · 060f7c9b
  Amine GHOZLANE authored Jun 17, 2020
  
  060f7c9b
11 Jun, 2020 1 commit
- Debug export format for heatmap comp · eec80d03
  Amine GHOZLANE authored Jun 11, 2020
  
  eec80d03
09 Jun, 2020 1 commit
- Add export tables · c2e3d1e6
  Amine GHOZLANE authored Jun 09, 2020
  
  c2e3d1e6
07 Nov, 2019 1 commit
- Add message for NAR journal · 7334a71b
  Amine GHOZLANE authored Nov 07, 2019
  
  7334a71b
10 Oct, 2019 1 commit
- Renewed the mock dataset · 3480c670
  Amine GHOZLANE authored Oct 10, 2019
  
  3480c670
09 Oct, 2019 1 commit
- Deactivate Custom selection · 255818bd
  Amine GHOZLANE authored Oct 09, 2019
  
  255818bd
07 Oct, 2019 1 commit
- Solved issue with missing data in diversities · 1b6761f1
  Amine GHOZLANE authored Oct 07, 2019
  
  1b6761f1
02 Oct, 2019 1 commit
- Solve a defective case with the weighted normalization · d82b7044
  Amine GHOZLANE authored Oct 02, 2019
  
  d82b7044
27 Sep, 2019 1 commit
- Debug 1 modality case in barplot and heatmap, rename the statistical methods · 87292543
  Amine GHOZLANE authored Sep 27, 2019
  
  87292543
26 Sep, 2019 1 commit
- rename normalization method and change default mode · 72311614
  Amine GHOZLANE authored Sep 26, 2019
  
  72311614
25 Sep, 2019 1 commit
- Debug DESeq worker when the data are large and we want to expand the contrast · 3f77e0b2
  Amine GHOZLANE authored Sep 25, 2019
  
  3f77e0b2
18 Sep, 2019 5 commits
- Update installation message · 310bfc18
  Amine GHOZLANE authored Sep 18, 2019
  
  310bfc18
- Be careful on the docker · 38288008
  Amine GHOZLANE authored Sep 18, 2019
  
  38288008
- Be careful on the docker · 27c7f272
  Amine GHOZLANE authored Sep 18, 2019
  
  27c7f272
- Update treeweight and resolve export table · ae981ac2
  Amine GHOZLANE authored Sep 18, 2019
  
  ae981ac2
- Force expended model · 663d1592
  Amine GHOZLANE authored Sep 18, 2019
  
  663d1592
12 Sep, 2019 1 commit
- Be sure to use DESeq2shaman and improvement of treeweight · e676c88e
  Amine GHOZLANE authored Sep 12, 2019
  
  e676c88e
05 Sep, 2019 4 commits
- Check numeric values in biom sample_metadata · 73cdf25b
  Amine GHOZLANE authored Sep 05, 2019
  
  73cdf25b
- Improved appearance of the tree weight · b4721dac
  Amine GHOZLANE authored Sep 05, 2019
  
  b4721dac
- Fix strange random · 319523d6
  Amine GHOZLANE authored Sep 05, 2019
  
  319523d6
- Debug issue when missing conditions on diversity, activate parallel deseq case... · bf389c01
  Amine GHOZLANE authored Sep 05, 2019
```
Debug issue when missing conditions on diversity, activate parallel deseq case and debug eps export with diversity
```
  bf389c01
03 Sep, 2019 1 commit
- Debug datataxo button · 46dd966d
  Amine GHOZLANE authored Sep 03, 2019
  
  46dd966d
02 Sep, 2019 2 commits
- Update introduction message · 7b219763
  Amine GHOZLANE authored Sep 02, 2019
  
  7b219763
- Add several example dataset and debug the project loading · f5c4129a
  Amine GHOZLANE authored Sep 02, 2019
  
  f5c4129a
30 Aug, 2019 3 commits
- Still solving issues with conda release on linux · 5d217f8f
  Amine GHOZLANE authored Aug 30, 2019
  
  5d217f8f
- Update gitlab ci behavior · 5db34704
  Amine GHOZLANE authored Aug 30, 2019
  
  5db34704
- Update README and documentation. Large improvement of the conda install and we... · d8516383
  Amine GHOZLANE authored Aug 30, 2019
```
Update README and documentation. Large improvement of the conda install and we get closer to the publication
```
  d8516383
29 Aug, 2019 4 commits
- Solve issue with the tag · 49ae78f4
  Amine GHOZLANE authored Aug 29, 2019
  
  49ae78f4
- debug gitlabci · 1e62223f
  Amine GHOZLANE authored Aug 29, 2019
  
  1e62223f
- debug conda install · 147ed2eb
  Amine GHOZLANE authored Aug 29, 2019
  
  147ed2eb
- Add conda install · a52f364c
  Amine GHOZLANE authored Aug 29, 2019
  
  a52f364c
28 Aug, 2019 2 commits
- Add save experiment and check for galaxy issue · c1430724
  Amine GHOZLANE authored Aug 28, 2019
  
  c1430724
- Activate export button · a2cb61f7
  Amine GHOZLANE authored Aug 28, 2019
  
  a2cb61f7