Commits · master · Amine GHOZLANE / shaman

05 May, 2021 1 commit
- Raw read submission is back · 82325653
  Amine GHOZLANE authored May 05, 2021
  
  82325653
28 Apr, 2021 1 commit
- Add news · 113ff4fc
  Amine GHOZLANE authored Apr 28, 2021
  
  113ff4fc
26 Feb, 2021 1 commit
- Add localhost message · b995a3a3
  Amine GHOZLANE authored Feb 26, 2021
  
  b995a3a3
25 Feb, 2021 5 commits
- Let's try to force the push · 197e90f7
  Amine GHOZLANE authored Feb 25, 2021
  
  197e90f7
- Let's try to force the push · 580e4d18
  Amine GHOZLANE authored Feb 25, 2021
  
  580e4d18
- Second try to fix conda push · 9a4f2515
  Amine GHOZLANE authored Feb 25, 2021
  
  9a4f2515
- Second try to fix conda push · 2c87ce99
  Amine GHOZLANE authored Feb 25, 2021
  
  2c87ce99
- Fix shaman on conda · 62bd1b73
  Amine GHOZLANE authored Feb 25, 2021
  
  62bd1b73
24 Feb, 2021 1 commit
- Add test for meta yml · 6b7a663f
  Amine GHOZLANE authored Feb 24, 2021
  
  6b7a663f
23 Feb, 2021 2 commits
- Add stringr library · 725dd0a6
  Amine GHOZLANE authored Feb 23, 2021
  
  725dd0a6
- Let's support complete lineage · c8549fe3
  Amine GHOZLANE authored Feb 23, 2021
  
  c8549fe3
22 Feb, 2021 1 commit
- Remove missing levels · f3e618b2
  Amine GHOZLANE authored Feb 22, 2021
  
  f3e618b2
19 Feb, 2021 1 commit
- Add epi2me support · b2b05954
  Amine GHOZLANE authored Feb 19, 2021
  
  b2b05954
08 Dec, 2020 1 commit
- Add new color palettes · 3fcf4e7f
  Amine GHOZLANE authored Dec 08, 2020
  
  3fcf4e7f
03 Dec, 2020 1 commit
- File extension fixed · 9bc232d6
  Amine GHOZLANE authored Dec 03, 2020
  
  9bc232d6
28 Oct, 2020 1 commit
- Update conda and docker install, better load .fq files · c51d126a
  Amine GHOZLANE authored Oct 28, 2020
  
  c51d126a
27 Aug, 2020 1 commit
- Debug one specie issue in boxplot and barplot · 02e7b2e0
  Amine GHOZLANE authored Aug 27, 2020
  
  02e7b2e0
26 Aug, 2020 1 commit
- Fix for rNVD3shaman for docker install · 1bf6d75f
  Amine GHOZLANE authored Aug 26, 2020
  
  1bf6d75f
25 Aug, 2020 1 commit
- Let's go for 100 percent of https · de23e039
  Amine GHOZLANE authored Aug 25, 2020
  
  de23e039
19 Aug, 2020 1 commit
- Add shaman publication · 98786eae
  Amine GHOZLANE authored Aug 19, 2020
  
  98786eae
24 Jul, 2020 1 commit
- Debug source version issue · e8f1811e
  Amine GHOZLANE authored Jul 24, 2020
  
  e8f1811e
23 Jul, 2020 1 commit
- Improved export for volcano plot, debug diversity confidence interval · 8f823aa5
  Amine GHOZLANE authored Jul 23, 2020
  
  8f823aa5
17 Jun, 2020 1 commit
- Add export of the tree · 060f7c9b
  Amine GHOZLANE authored Jun 17, 2020
  
  060f7c9b
11 Jun, 2020 1 commit
- Debug export format for heatmap comp · eec80d03
  Amine GHOZLANE authored Jun 11, 2020
  
  eec80d03
09 Jun, 2020 1 commit
- Add export tables · c2e3d1e6
  Amine GHOZLANE authored Jun 09, 2020
  
  c2e3d1e6
07 Nov, 2019 1 commit
- Add message for NAR journal · 7334a71b
  Amine GHOZLANE authored Nov 07, 2019
  
  7334a71b
10 Oct, 2019 1 commit
- Renewed the mock dataset · 3480c670
  Amine GHOZLANE authored Oct 10, 2019
  
  3480c670
09 Oct, 2019 1 commit
- Deactivate Custom selection · 255818bd
  Amine GHOZLANE authored Oct 09, 2019
  
  255818bd
07 Oct, 2019 1 commit
- Solved issue with missing data in diversities · 1b6761f1
  Amine GHOZLANE authored Oct 07, 2019
  
  1b6761f1
02 Oct, 2019 1 commit
- Solve a defective case with the weighted normalization · d82b7044
  Amine GHOZLANE authored Oct 02, 2019
  
  d82b7044
27 Sep, 2019 1 commit
- Debug 1 modality case in barplot and heatmap, rename the statistical methods · 87292543
  Amine GHOZLANE authored Sep 27, 2019
  
  87292543
26 Sep, 2019 1 commit
- rename normalization method and change default mode · 72311614
  Amine GHOZLANE authored Sep 26, 2019
  
  72311614
25 Sep, 2019 1 commit
- Debug DESeq worker when the data are large and we want to expand the contrast · 3f77e0b2
  Amine GHOZLANE authored Sep 25, 2019
  
  3f77e0b2
18 Sep, 2019 5 commits
- Update installation message · 310bfc18
  Amine GHOZLANE authored Sep 18, 2019
  
  310bfc18
- Be careful on the docker · 38288008
  Amine GHOZLANE authored Sep 18, 2019
  
  38288008
- Be careful on the docker · 27c7f272
  Amine GHOZLANE authored Sep 18, 2019
  
  27c7f272
- Update treeweight and resolve export table · ae981ac2
  Amine GHOZLANE authored Sep 18, 2019
  
  ae981ac2
- Force expended model · 663d1592
  Amine GHOZLANE authored Sep 18, 2019
  
  663d1592
12 Sep, 2019 1 commit
- Be sure to use DESeq2shaman and improvement of treeweight · e676c88e
  Amine GHOZLANE authored Sep 12, 2019
  
  e676c88e
05 Sep, 2019 1 commit
- Check numeric values in biom sample_metadata · 73cdf25b
  Amine GHOZLANE authored Sep 05, 2019
  
  73cdf25b