From 05012845655068c94d3b2fe8b79eb7303fdc4cf8 Mon Sep 17 00:00:00 2001
From: Amandine PERRIN <amandine.perrin@pasteur.fr>
Date: Mon, 27 Nov 2017 17:56:52 +0100
Subject: [PATCH] Add mafft installation
---
for_tests/Dockerfile | 11 +++++++++++
1 file changed, 11 insertions(+)
diff --git a/for_tests/Dockerfile b/for_tests/Dockerfile
index 9228867e..634dcf44 100644
--- a/for_tests/Dockerfile
+++ b/for_tests/Dockerfile
@@ -47,3 +47,14 @@ RUN wget https://mmseqs.com/latest/mmseqs-static_sse41.tar.gz &&\
mv /tmp/mmseqs2/bin/mmseqs /usr/local/bin &&\
# remove useless files
rm -r /tmp/mmseqs2
+
+
+# Install mafft 7.313
+WORKDIR /tmp
+RUN wget https://mafft.cbrc.jp/alignment/software/mafft-7.313-with-extensions-src.tgz &&\
+ tar xf mafft-7.313-with-extensions-src.tgz &&\
+ rm mafft-7.313-with-extensions-src.tgz
+WORKDIR /tmp/mafft-7.313-with-extensions/core
+RUN make clean &&\
+ make &&\
+ make install
\ No newline at end of file
--
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