diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 7a1a0654a0db87a141df23765b280c8b9accf2b9..e27b7bc01f7b09d0953e86cf78750ced65d52333 100755
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -107,15 +107,15 @@ func-test-ubuntu:
     - pip3 install -r requirements-dev.txt
     - ./make
   script:
-    - py.test test/test_functional/test_pangenome.py -vx
-    - py.test test/test_functional/test_pangenome-parser.py -vx
-    - py.test test/test_functional/test_corepers* -vx
-    - py.test test/test_functional/test_align-parser.py -vx
-    - py.test test/test_functional/test_align.py -vx
-    - py.test test/test_functional/test_tree* -vx
-    - py.test test/test_functional/test_annote-parser.py -vx
-    - py.test test/test_functional/test_annote.py -xv
-    - py.test test/test_functional/test_all* -vx
+    # - py.test test/test_functional/test_pangenome.py -vx
+    # - py.test test/test_functional/test_pangenome-parser.py -vx
+    # - py.test test/test_functional/test_corepers* -vx
+    # - py.test test/test_functional/test_align-parser.py -vx
+    # - py.test test/test_functional/test_align.py -vx
+    # - py.test test/test_functional/test_tree* -vx
+    # - py.test test/test_functional/test_annote-parser.py -vx
+    # - py.test test/test_functional/test_annote.py -xv
+    # - py.test test/test_functional/test_all* -vx
     - py.test test/test_functional/test_prepare* -vx
     - coverage report
     - mv .coverage .coverage.functional