From 11efe1704e6f73b404bd8c0b62d617d5d5fd41ef Mon Sep 17 00:00:00 2001
From: Amandine PERRIN <amandine.perrin@pasteur.fr>
Date: Thu, 14 Sep 2023 14:40:42 +0200
Subject: [PATCH] v1.4.1
Changes:
- Uses pyproject.toml instead of setup.py for installation
- update minimal requirement for ncbi_genome_download to be compatible with the last NCBI format (issue #42)
- use --amino option for mafft protein alignements in order to force sequence type to be proteic and deal with ambiguous aa (see https://github.com/gem-pasteur/PanACoTA/commit/728445dd84f8b5d159c97371ee828ea8761ea938#commitcomment-122306169)
- fix issue with protein names. They must fulfill the conditions described in https://aperrin.pages.pasteur.fr/pipeline_annotation/html-doc/usage.html\#protein-files
---
PanACoTA/__init__.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/PanACoTA/__init__.py b/PanACoTA/__init__.py
index 5d36c70..598438b 100755
--- a/PanACoTA/__init__.py
+++ b/PanACoTA/__init__.py
@@ -1,5 +1,5 @@
"""PanACoTA"""
-__version__ = "1.4.1-dev4"
+__version__ = "1.4.1"
--
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