diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 163ba75768d3f510608abe4428447a39f1b02c57..349aa33f1790259f079f6e6627e3ecc792129efd 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -38,3 +38,13 @@ build-install-barrnap:
     - git checkout master -- pythoncode/requirements.txt
     - docker build --pull -t "$CI_REGISTRY_IMAGE:install-ubuntu-barrnapOnly" for_build/barrnap_only
     - docker push "$CI_REGISTRY_IMAGE:install-ubuntu-barrnapOnly"
+
+build-install-prokka:
+  only:
+    - docker
+  stage: build
+  script:
+    - apk update ; apk add git
+    - git checkout master -- pythoncode/requirements.txt
+    - docker build --pull -t "$CI_REGISTRY_IMAGE:install-ubuntu-prokkaOnly" for_build/prokka_only
+    - docker push "$CI_REGISTRY_IMAGE:install-ubuntu-prokkaOnly"
diff --git a/for_build/prokka_only/Dockerfile b/for_build/prokka_only/Dockerfile
new file mode 100644
index 0000000000000000000000000000000000000000..54a54a40616f16c2783458f8f83bf4194d37deab
--- /dev/null
+++ b/for_build/prokka_only/Dockerfile
@@ -0,0 +1,26 @@
+from ubuntu:16.04
+
+# Update apt-get packages
+RUN apt-get update &&\
+    apt-get -y upgrade
+
+# Install package needed
+RUN apt-get install -y \
+        wget \
+        python3-pip
+
+# Update pip
+RUN pip3 install --upgrade pip
+
+# Install prokka:
+WORKDIR /tmp
+RUN apt-get install -y\
+        libdatetime-perl \
+        libxml-simple-perl \
+        libdigest-md5-perl \
+        git \
+        default-jre \
+        bioperl
+RUN git clone https://github.com/tseemann/prokka.git
+RUN /tmp/prokka/bin/prokka --setupdb
+RUN ln -s /tmp/prokka/bin/prokka /usr/local/bin