From 317c4d6f00a7297d41a9e02b2f93879c260a6600 Mon Sep 17 00:00:00 2001 From: Amandine PERRIN <amandine.perrin@pasteur.fr> Date: Tue, 18 Aug 2020 11:39:08 +0200 Subject: [PATCH] update copyright --- COPYRIGHT | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/COPYRIGHT b/COPYRIGHT index cb8ae7dc..42641253 100644 --- a/COPYRIGHT +++ b/COPYRIGHT @@ -1,10 +1,10 @@ -PanACOTA - PanACOTA is a software providing tools for large scale bacterial comparative genomics. From a set of complete and/or draft genomes, you can: +PanACoTA (PANgenome with Annotations, COre identification, Tree and corresponding Alignments) is a software providing tools for large scale bacterial comparative genomics. You can download all refseq genomes for a given species, or use your set of complete and/or draft genomes, to: - - Do a quality control of your strains, to eliminate poor quality genomes, which would not give any information for the comparative study - - Uniformly annotate all genomes - - Do a Pan-genome - - Do a Core or Persistent genome - - Align all Core/Persistent families - - Infer a phylogenetic tree from the Core/Persistent families +- Do a quality control of your strains, to eliminate poor quality genomes, which would not give any information for the comparative study +- Uniformly annotate all genomes (with functional annotation, or only syntactic annotation, according to your needs) +- Do a Pan-genome +- Do a Core or Persistent genome +- Align all Core/Persistent families +- Infer a phylogenetic tree from the Core/Persistent families -Copyright © 2016-2018 Institut Pasteur (Paris). +Copyright © 2020 Institut Pasteur (Paris). -- GitLab