From 3e960781b0bf2b7dc000292d02899b5cf5978256 Mon Sep 17 00:00:00 2001
From: Amandine PERRIN <amandine.perrin@pasteur.fr>
Date: Sat, 12 Sep 2020 15:20:06 +0200
Subject: [PATCH] Add citation to README and doc

---
 README.md            | 4 ++++
 doc/source/index.rst | 3 ++-
 2 files changed, 6 insertions(+), 1 deletion(-)

diff --git a/README.md b/README.md
index d0db2629..da910c29 100755
--- a/README.md
+++ b/README.md
@@ -25,6 +25,10 @@ This README file provides some essential information to install/use PanACoTA. Bu
 - Align all Core/Persistent families
 - Infer a phylogenetic tree from the Core/Persistent families
 
+If you use PanACoTA, please cite:
+
+PERRIN, A., & ROCHA, E. (2020). PanACoTA: A modular tool for massive microbial comparative genomics. BioRxiv. https://doi.org/10.1101/2020.09.11.293472
+
 
 # Installation
 
diff --git a/doc/source/index.rst b/doc/source/index.rst
index 730bd376..cd36d513 100644
--- a/doc/source/index.rst
+++ b/doc/source/index.rst
@@ -5,7 +5,8 @@ Welcome to PanACoTA's documentation!
 
 If you use PanACoTA, please cite:
 
-XXXXXXXXX
+PERRIN, A., & ROCHA, E. (2020). PanACoTA: A modular tool for massive microbial comparative genomics. BioRxiv. https://doi.org/10.1101/2020.09.11.293472
+
 
 
 .. toctree::
-- 
GitLab