From 3f740c9424a119116c7fc6fb226f0dbc09aac0bc Mon Sep 17 00:00:00 2001 From: aperrin <amandine.perrin@pasteur.fr> Date: Fri, 8 Dec 2017 11:52:39 +0100 Subject: [PATCH] Add FastTreeMP installation --- for_tests/Dockerfile | 9 ++++++++- 1 file changed, 8 insertions(+), 1 deletion(-) diff --git a/for_tests/Dockerfile b/for_tests/Dockerfile index 634dcf44..501a2ebc 100644 --- a/for_tests/Dockerfile +++ b/for_tests/Dockerfile @@ -57,4 +57,11 @@ RUN wget https://mafft.cbrc.jp/alignment/software/mafft-7.313-with-extensions-sr WORKDIR /tmp/mafft-7.313-with-extensions/core RUN make clean &&\ make &&\ - make install \ No newline at end of file + make install + +# Install FastTree +WORKDIR /tmp +RUN wget http://www.microbesonline.org/fasttree/FastTree.c &&\ + gcc -DOPENMP -fopenmp -DUSE_DOUBLE -Wall -O3 -finline-functions -funroll-loops -o FastTreeMP FastTree.c -lm &&\ + ln -s /tmp/FastTreeMP /usr/local/bin + -- GitLab