From 53a1617d4624cccff485dd6d8238c8c39f19977a Mon Sep 17 00:00:00 2001 From: Amandine PERRIN <amandine.perrin@pasteur.fr> Date: Thu, 30 Jul 2020 19:22:41 +0200 Subject: [PATCH] add prodigal to docker image for tests --- for_tests/Dockerfile | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/for_tests/Dockerfile b/for_tests/Dockerfile index b2126be8..463042ba 100644 --- a/for_tests/Dockerfile +++ b/for_tests/Dockerfile @@ -41,6 +41,14 @@ RUN wget https://github.com/tseemann/barrnap/archive/0.8.tar.gz &&\ # Remove heavy useless files rm -r /tmp/barrnap-0.8/examples /tmp/barrnap-0.8/build/*.aln +# Install prodigal +WORKDIR /tmp +RUN wget https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz &&\ + tar -xzf v2.6.3.tar.gz &&\ + rm v2.6.3.tar.gz +WORKDIR /tmp/Prodigal-2.6.3 +RUN make &&\ + make install # Install prokka: WORKDIR /tmp -- GitLab