From 5c7d6b43d9213f66c303ac9f59785cf527955efb Mon Sep 17 00:00:00 2001
From: asetGem <amandine.perrin@pasteur.fr>
Date: Fri, 30 Jul 2021 14:20:12 +0200
Subject: [PATCH] redo all unit and functional tests
---
.gitlab-ci.yml | 40 ++++++++++++++++++++--------------------
1 file changed, 20 insertions(+), 20 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index e247ec1e..7a04957c 100755
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -77,17 +77,17 @@ unit-test-ubuntu:
script:
- ls Examples/genomes_init/genome1.fst
- py.test test/test_unit/test_utils.py -vx
- # - py.test test/test_unit/test_utils-logging.py -xv
- # - py.test test/test_unit/test_utils-pan.py -vx
- # - py.test test/test_unit/test_utils-argparse.py -vx
- # - py.test test/test_unit/test_prepare -v -x
- # - py.test test/test_unit/test_annotate/test_genome_func.py -vx
- # - py.test test/test_unit/test_annotate/test_annotation* -vx
- # - py.test test/test_unit/test_annotate/test_format* -v -x
- # - py.test test/test_unit/test_pangenome -vx
- # - py.test test/test_unit/test_corepers -vx
- # - py.test test/test_unit/test_align -vx
- # - py.test test/test_unit/test_tree -xv
+ - py.test test/test_unit/test_utils-logging.py -xv
+ - py.test test/test_unit/test_utils-pan.py -vx
+ - py.test test/test_unit/test_utils-argparse.py -vx
+ - py.test test/test_unit/test_prepare -v -x
+ - py.test test/test_unit/test_annotate/test_genome_func.py -vx
+ - py.test test/test_unit/test_annotate/test_annotation* -vx
+ - py.test test/test_unit/test_annotate/test_format* -v -x
+ - py.test test/test_unit/test_pangenome -vx
+ - py.test test/test_unit/test_corepers -vx
+ - py.test test/test_unit/test_align -vx
+ - py.test test/test_unit/test_tree -xv
- coverage report
- mv .coverage .coverage-unit
artifacts:
@@ -107,16 +107,16 @@ func-test-ubuntu:
- pip3 install -r requirements-dev.txt
- ./make
script:
- # - py.test test/test_functional/test_pangenome.py -vx
+ - py.test test/test_functional/test_pangenome.py -vx
- py.test test/test_functional/test_pangenome-parser.py -vx
- # - py.test test/test_functional/test_corepers* -vx
- # - py.test test/test_functional/test_align-parser.py -vx
- # - py.test test/test_functional/test_align.py -vx
- # - py.test test/test_functional/test_tree* -vx
- # - py.test test/test_functional/test_annote-parser.py -vx
- # - py.test test/test_functional/test_annote.py -xv
- # - py.test test/test_functional/test_all* -vx
- # - py.test test/test_functional/test_prepare* -vx
+ - py.test test/test_functional/test_corepers* -vx
+ - py.test test/test_functional/test_align-parser.py -vx
+ - py.test test/test_functional/test_align.py -vx
+ - py.test test/test_functional/test_tree* -vx
+ - py.test test/test_functional/test_annote-parser.py -vx
+ - py.test test/test_functional/test_annote.py -xv
+ - py.test test/test_functional/test_all* -vx
+ - py.test test/test_functional/test_prepare* -vx
- coverage report
- mv .coverage .coverage-functional
artifacts:
--
GitLab