From 6278862b6c959ee1f2c9b0cfa25dfbd8853d4797 Mon Sep 17 00:00:00 2001
From: Amandine PERRIN <amandine.perrin@pasteur.fr>
Date: Thu, 29 Aug 2019 13:09:56 +0200
Subject: [PATCH] Do not propagate loggers
Root logger modified by ncbi-genome-download must not affect my own logger
---
PanACoTA/utils.py | 1 +
1 file changed, 1 insertion(+)
diff --git a/PanACoTA/utils.py b/PanACoTA/utils.py
index f438fde7..d4f45c6f 100755
--- a/PanACoTA/utils.py
+++ b/PanACoTA/utils.py
@@ -172,6 +172,7 @@ def init_logger(logfile_base, level, name, details=False, verbose=0, quiet=False
err_handler.setLevel(logging.ERROR) # write all messages >= ERROR
err_handler.setFormatter(formatter_stream)
logger.addHandler(err_handler) # add handler to logger
+ logger.propagate = False
return logfile, logger
--
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