diff --git a/README.md b/README.md
index 9afd2f2f6cfb8a71c9a0dd1f0ce59b8699b263ab..1d5563b3267d0efc7d3ae58533aaa8420a6f088e 100755
--- a/README.md
+++ b/README.md
@@ -51,6 +51,7 @@ Installation
 - [pip](#pypi)
 - [cloning github repository](#clone)
 - [singularity](#singularity)
+- [conda](#conda)
 
 Running
 - [Quick run](#run)
@@ -145,6 +146,19 @@ To get latest version:
 
 It will replace your file panacota.img by a new one corresponding to the latest version.
 
+### <a name="conda"></a> From conda
+
+Be careful while using conda, especially if you are not familiar with it. We advise to install PanACoTA in a dedicated conda environment, in order to avoid unwanted interactions with other softwares (like needed versions of dependencies automatically installed by conda). To install the package, use `conda install -c bioconda panacota`. But, as described in [conda documentation](https://docs.conda.io/projects/conda/en/latest/user-guide/tasks/manage-environments.html#id6), we advise to install it with:
+
+    # Create an environment: This creates the 'myenv' environment in '/envs/'. No packages will be installed in this environment.
+    conda create --name myenv
+    # Activate the environment
+    conda activate myenv
+    # Install PanACoTA
+    conda install -c bioconda panacota
+    # When you have finished using PanACoTA, deactivate environment
+    conda deactivate
+
 ### From zip version
 
 For people wanting to download source code of a specific version, we provide releases. You can download last one here: [![GitHub release](https://img.shields.io/github/release/gem-pasteur/PanACoTA.svg)](https://github.com/gem-pasteur/PanACoTA/releases)
diff --git a/doc/source/starting.rst b/doc/source/starting.rst
index cc4dc5dc59dd958fbb84d1ba51687f57ee9014d3..7ca923a159248c4a9cd560a6e76c9da8b3ef0799 100755
--- a/doc/source/starting.rst
+++ b/doc/source/starting.rst
@@ -134,6 +134,24 @@ To get latest version:
 
 It will replace your file ``panacota.img`` by a new one corresponding to the latest version.
 
+From conda
+**********
+
+Be careful while using conda, especially if you are not familiar with it. We advise to install PanACoTA in a dedicated conda environment, in order to avoid unwanted interactions with other softwares (like needed versions of dependencies automatically installed by conda). To install the package, use ``conda install -c bioconda panacota``. But, as described in `conda documentation <https://docs.conda.io/projects/conda/en/latest/user-guide/tasks/manage-environments.html#id6>`_, we advise to install it with:
+
+.... code-block:: bash
+
+    source
+    # Create an environment: This creates the 'myenv' environment in '/envs/'. No packages will be installed in this environment.
+    conda create --name myenv
+    # Activate the environment
+    conda activate myenv
+    # Install PanACoTA
+    conda install -c bioconda panacota
+    # When you have finished using PanACoTA, deactivate environment
+    conda deactivate
+
+
 
 From zip version
 ****************