From a2be7dd78a39b1038c97413a3f945526377e9fd1 Mon Sep 17 00:00:00 2001
From: Amandine PERRIN <amandine.perrin@pasteur.fr>
Date: Tue, 16 Apr 2019 12:44:23 +0200
Subject: [PATCH] Add uninstall-install.sh script to helpers branch

---
 uninstall-install.sh | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)
 create mode 100755 uninstall-install.sh

diff --git a/uninstall-install.sh b/uninstall-install.sh
new file mode 100755
index 00000000..df55e85b
--- /dev/null
+++ b/uninstall-install.sh
@@ -0,0 +1,23 @@
+#!/bin/bash
+
+
+# Remove softs
+mv /usr/local/bin/barrnap /usr/local/bin/barrnap.save
+mv /usr/local/bin/prokka /usr/local/bin/prokka.save
+mv /usr/local/bin/prodigal /usr/local/bin/prodigal.save
+mv /usr/local/bin/mafft /usr/local/bin/mafft.save
+mv /usr/local/bin/mmseqs /usr/local/bin/mmseqs.save
+mv /usr/local/bin/quicktree /usr/local/bin/quicktree.save
+mv /usr/local/bin/fastme /usr/local/bin/fastme.save
+mv /usr/local/bin/FastTreeMP /usr/local/bin/FastTreeMP.save
+
+# Put softs back
+
+mv /usr/local/bin/barrnap.save /usr/local/bin/barrnap
+mv /usr/local/bin/prokka.save /usr/local/bin/prokka
+mv /usr/local/bin/prodigal.save /usr/local/bin/prodigal
+mv /usr/local/bin/mafft.save /usr/local/bin/mafft
+mv /usr/local/bin/mmseqs.save /usr/local/bin/mmseqs
+mv /usr/local/bin/quicktree.save /usr/local/bin/quicktree
+mv /usr/local/bin/fastme.save /usr/local/bin/fastme
+mv /usr/local/bin/FastTreeMP.save /usr/local/bin/FastTreeMP
-- 
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