diff --git a/containers/Dockerfile b/containers/Dockerfile index 5b6ed52c1e4f262ddb53b1cc37c64b25f2d5ad60..ffa657cfcef85dface6937728b8d5173c63f2070 100644 --- a/containers/Dockerfile +++ b/containers/Dockerfile @@ -73,7 +73,7 @@ RUN git clone https://github.com/tseemann/prokka.git RUN /install_dir/prokka/bin/prokka --setupdb &&\ ln -s /install_dir/prokka/bin/prokka /usr/local/bin # install tbl2asn (used by prokka) -RUN wget -O tbl2asn.gz ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/converters/by_program/tbl2asn/linux.tbl2asn.gz &&\ +RUN wget -O tbl2asn.gz https://ftp.ncbi.nlm.nih.gov/asn1-converters/by_program/table2asn/linux64.table2asn.gz &&\ gunzip tbl2asn.gz &&\ chmod +x tbl2asn &&\ ln -s /install_dir/tbl2asn /usr/local/bin @@ -113,9 +113,9 @@ WORKDIR /install_dir RUN apt-get install -y automake &&\ git clone https://gite.lirmm.fr/atgc/FastME.git WORKDIR /install_dir/FastME/tarball -RUN tar xzf fastme-2.1.6.2.tar.gz &&\ - rm fastme-2.1.6.2.tar.gz &&\ - ln -s /install_dir/FastME/tarball/fastme-2.1.6.2/binaries/fastme-2.1.6.2-linux64-omp /usr/local/bin/fastme +RUN tar xzf fastme-2.1.6.4.tar.gz &&\ + rm fastme-2.1.6.4.tar.gz &&\ + ln -s /install_dir/FastME/tarball/fastme-2.1.6.2/binaries/fastme-2.1.6.4-linux64-omp /usr/local/bin/fastme # Install quicktree WORKDIR /install_dir