From c82d537b796513ad66ac0261cd55e48b625d7ac5 Mon Sep 17 00:00:00 2001
From: Amandine PERRIN <amandine.perrin@pasteur.fr>
Date: Thu, 12 Sep 2019 11:26:36 +0200
Subject: [PATCH] Possibility to change separator in list_to_str
---
PanACoTA/utils.py | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/PanACoTA/utils.py b/PanACoTA/utils.py
index 13ca5fdc..108df9d1 100755
--- a/PanACoTA/utils.py
+++ b/PanACoTA/utils.py
@@ -1220,7 +1220,7 @@ def write_list(list_names, fileout):
fo.write(genome + "\n")
-def list_to_str(list):
+def list_to_str(list, sep='\t'):
"""
Return a string corresponding to the given list, with all elements separated
by a space. Used to write a list into a file. Ex::
@@ -1231,6 +1231,8 @@ def list_to_str(list):
----------
list : list
list of elements that we would like to write
+ sep : str
+ Separator to use between the different elements
Returns
-------
@@ -1238,7 +1240,7 @@ def list_to_str(list):
the string to write
"""
list_write = [str(l) for l in list]
- return " ".join(list_write) + "\n"
+ return sep.join(list_write) + "\n"
def remove(infile):
--
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