diff --git a/test/test_install/test_make_all-installed.py b/test/test_install/test_make_all-installed.py index ddf292023d4a673b961715a1c398651348ef4040..6a854dc179f0a79f49d24916bdd8d806dd86faba 100755 --- a/test/test_install/test_make_all-installed.py +++ b/test/test_install/test_make_all-installed.py @@ -92,7 +92,7 @@ def test_upgrade(install_panacota): """ Test upgrading PanACoTA when dependencies are still installed """ - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert utils.check_installed("FastTreeMP") assert utils.check_installed("PanACoTA") @@ -100,7 +100,7 @@ def test_upgrade(install_panacota): cmd = "python3 make upgrade" error = "Error upgrade" utils.run_cmd(cmd, error) - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert utils.check_installed("PanACoTA") assert utils.check_installed("FastTreeMP") @@ -121,14 +121,14 @@ def test_upgrade_notinstalled(): cmd = "python3 make uninstall" error = "Error trying to uninstall PanACoTa" utils.run_cmd(cmd, error) - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert utils.check_installed("FastTreeMP") assert not utils.check_installed("PanACoTA") cmd = "python3 make upgrade" error = "Error upgrade" utils.run_cmd(cmd, error) - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert utils.check_installed("PanACoTA") assert utils.check_installed("FastTreeMP") @@ -146,7 +146,7 @@ def test_uninstall(install_panacota): """ Test uninstalling PanACoTA when dependencies are still installed """ - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert utils.check_installed("PanACoTA") assert utils.check_installed("FastTreeMP") @@ -154,7 +154,7 @@ def test_uninstall(install_panacota): error = "Error uninstalling" utils.run_cmd(cmd, error) assert not utils.check_installed("PanACoTA") - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert utils.check_installed("mash") assert utils.check_installed("FastTreeMP") @@ -177,12 +177,12 @@ def test_develop(): error = "Error trying to uninstall PanACoTa" utils.run_cmd(cmd, error) assert not utils.check_installed("PanACoTA") - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") cmd = "python3 make develop" error = "Error develop" utils.run_cmd(cmd, error) - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert utils.check_installed("PanACoTA") # Check installed in developper mode (egg-info file is present) @@ -226,12 +226,12 @@ def test_install_user(): utils.run_cmd(cmd, error) cmd = "python3 make --user" error = "Error trying to install PanACoTA from base" - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert not utils.check_installed("PanACoTA") assert utils.check_installed("FastTreeMP") utils.run_cmd(cmd, error) - assert utils.check_installed("barrnap") + # assert utils.check_installed("barrnap") assert utils.check_installed("prokka") assert utils.check_installed("PanACoTA") assert utils.check_installed("FastTreeMP")