From d2da8d9df82de71a202050df39a87f2aebc56201 Mon Sep 17 00:00:00 2001 From: asetGem <amandine.perrin@pasteur.fr> Date: Tue, 27 Apr 2021 16:37:51 +0200 Subject: [PATCH] add test_files for align unit tests --- .../data/align/test_files/pers_genome_complete-gembase.txt | 7 +++++++ .../align/test_files/pers_genome_gembase_member-bis.txt | 4 ++++ test/data/align/test_files/pers_genome_noformat.txt | 4 ++++ 3 files changed, 15 insertions(+) create mode 100644 test/data/align/test_files/pers_genome_complete-gembase.txt create mode 100644 test/data/align/test_files/pers_genome_gembase_member-bis.txt create mode 100644 test/data/align/test_files/pers_genome_noformat.txt diff --git a/test/data/align/test_files/pers_genome_complete-gembase.txt b/test/data/align/test_files/pers_genome_complete-gembase.txt new file mode 100644 index 00000000..857212d8 --- /dev/null +++ b/test/data/align/test_files/pers_genome_complete-gembase.txt @@ -0,0 +1,7 @@ +1 GEN4.1111.00001.C001_00001 GEN4.1111.00001.P001_00002 GENO.1216.00002.C002_00001 GENO.1216.00002.C002_00002 GENO.1216.00003.C001_00003 +3 GEN4.1111.00001.C001_00009 GEN4.1111.00001.P001_00011 GENO.1216.00002.C002_00010 GENO.1216.00003.C001_01010 +5 GEN4.1111.00001.C001_00002 GEN4.1111.00001.P001_00003 GENO.1216.00002.C002_00003 GENO.1216.00003.C001_00010 +8 GEN4.1111.00001.C001_00007 GEN4.1111.00001.P001_00009 GENO.1216.00002.C002_00008 +10 GEN4.1111.00001.C001_00004 GEN4.1111.00001.P001_00004 GENO.1216.00002.C002_00005 +11 GEN4.1111.00001.C001_00005 GEN4.1111.00001.P001_00005 GENO.1216.00002.C002_00006 +12 GEN4.1111.00001.C001_00008 GEN4.1111.00001.P001_00010 GENO.1216.00002.C002_00009 GENO.1216.00003.C001_00004 GENO.1216.00003.C001_01000 diff --git a/test/data/align/test_files/pers_genome_gembase_member-bis.txt b/test/data/align/test_files/pers_genome_gembase_member-bis.txt new file mode 100644 index 00000000..e2b5ca4c --- /dev/null +++ b/test/data/align/test_files/pers_genome_gembase_member-bis.txt @@ -0,0 +1,4 @@ +1 GEN4.1111.00001.0001b_00001 GENO.0817.00001.0001b_00002 GENO.1216.00002.0001b_00001 GENO.1216.00002.i0001_00002 GENO.1216.00003.i0001_00003 +5 GEN4.1111.00001.0001b_00009 GENO.0817.00001.0002b_00011 GENO.1216.00002.0002b_00010 GENO.1216.00003.i0001_01010 +12 GEN4.1111.00001.0001i_00005 GENO.0817.00001.0002i_00005 GENO.1216.00002.0001i_00006 +32 GEN4.1111.00001.0001i_00005 GENO.0817.00001.i0002_00010 GENO.1216.00002.b0002_00009 GENO.1216.00003.i0001_00004 GENO.1216.00003.i0001_01000 \ No newline at end of file diff --git a/test/data/align/test_files/pers_genome_noformat.txt b/test/data/align/test_files/pers_genome_noformat.txt new file mode 100644 index 00000000..d8d12c8f --- /dev/null +++ b/test/data/align/test_files/pers_genome_noformat.txt @@ -0,0 +1,4 @@ +1 my.genome-name_1 my-genome_1 genome1_1 genome3_1 genome1_10 +5 my.genome-name_2 my-genome_2 genome3_3 +12 my.genome-name_3 my-genome_3 genome1_3 +32 my.genome-name_4 my-genome_50 genome1_4 genome3_4 \ No newline at end of file -- GitLab