From f67ea743b99d0d79739a9347c0ed12fac7281f12 Mon Sep 17 00:00:00 2001
From: Amandine PERRIN <amandine.perrin@pasteur.fr>
Date: Mon, 3 Jul 2023 14:37:46 +0200
Subject: [PATCH] update versions in dockerfile
---
containers/Dockerfile | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/containers/Dockerfile b/containers/Dockerfile
index 5b6ed52c..ffa657cf 100644
--- a/containers/Dockerfile
+++ b/containers/Dockerfile
@@ -73,7 +73,7 @@ RUN git clone https://github.com/tseemann/prokka.git
RUN /install_dir/prokka/bin/prokka --setupdb &&\
ln -s /install_dir/prokka/bin/prokka /usr/local/bin
# install tbl2asn (used by prokka)
-RUN wget -O tbl2asn.gz ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/converters/by_program/tbl2asn/linux.tbl2asn.gz &&\
+RUN wget -O tbl2asn.gz https://ftp.ncbi.nlm.nih.gov/asn1-converters/by_program/table2asn/linux64.table2asn.gz &&\
gunzip tbl2asn.gz &&\
chmod +x tbl2asn &&\
ln -s /install_dir/tbl2asn /usr/local/bin
@@ -113,9 +113,9 @@ WORKDIR /install_dir
RUN apt-get install -y automake &&\
git clone https://gite.lirmm.fr/atgc/FastME.git
WORKDIR /install_dir/FastME/tarball
-RUN tar xzf fastme-2.1.6.2.tar.gz &&\
- rm fastme-2.1.6.2.tar.gz &&\
- ln -s /install_dir/FastME/tarball/fastme-2.1.6.2/binaries/fastme-2.1.6.2-linux64-omp /usr/local/bin/fastme
+RUN tar xzf fastme-2.1.6.4.tar.gz &&\
+ rm fastme-2.1.6.4.tar.gz &&\
+ ln -s /install_dir/FastME/tarball/fastme-2.1.6.2/binaries/fastme-2.1.6.4-linux64-omp /usr/local/bin/fastme
# Install quicktree
WORKDIR /install_dir
--
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