From a76b53a4af861c94e794ccdee9f6dc5730d82de5 Mon Sep 17 00:00:00 2001
From: Stephane Dallongeville <stephane.dallongeville@pasteur.fr>
Date: Mon, 15 Feb 2021 11:29:28 +0100
Subject: [PATCH] Fixed error spamming on haralick features descriptor
---
src/main/java/plugins/adufour/roi/ROIMeasures.java | 13 +++++++++++--
1 file changed, 11 insertions(+), 2 deletions(-)
diff --git a/src/main/java/plugins/adufour/roi/ROIMeasures.java b/src/main/java/plugins/adufour/roi/ROIMeasures.java
index 5265bf7..dc04f6f 100644
--- a/src/main/java/plugins/adufour/roi/ROIMeasures.java
+++ b/src/main/java/plugins/adufour/roi/ROIMeasures.java
@@ -9,8 +9,10 @@ import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collections;
import java.util.Comparator;
+import java.util.HashSet;
import java.util.List;
import java.util.Map;
+import java.util.Set;
import java.util.concurrent.Callable;
import java.util.concurrent.Future;
@@ -654,6 +656,7 @@ public class ROIMeasures extends EzPlug implements ROIBlock, GlobalSequenceListe
}
Map<ROIDescriptor, Object>[] haralickTextureValues = null;
+ Set<String> haralickErrors = new HashSet<>();
if (Measures.INTENSITY_TEXTURE_ASM.isSelected() || Measures.INTENSITY_TEXTURE_CONT.isSelected()
|| Measures.INTENSITY_TEXTURE_ENT.isSelected() || Measures.INTENSITY_TEXTURE_HOMO.isSelected())
{
@@ -673,8 +676,14 @@ public class ROIMeasures extends EzPlug implements ROIBlock, GlobalSequenceListe
}
catch (UnsupportedOperationException ex)
{
- System.err.println("Could not compute Haralick texture descriptor");
- ex.printStackTrace();
+ final String mess = ex.getMessage();
+
+ // we don't want to spam output with these errors
+ if (!haralickErrors.contains(mess))
+ {
+ haralickErrors.add(mess);
+ System.err.println(mess);
+ }
}
}
}
--
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