diff --git a/.venv/lib/python3.10/site-packages/debugpy/_vendored/pydevd/pydev_ipython/README b/.venv/lib/python3.10/site-packages/debugpy/_vendored/pydevd/pydev_ipython/README deleted file mode 100644 index 185d417d80dca8638c6b390b2333e1778193f862..0000000000000000000000000000000000000000 --- a/.venv/lib/python3.10/site-packages/debugpy/_vendored/pydevd/pydev_ipython/README +++ /dev/null @@ -1,8 +0,0 @@ -# Parts of IPython, files from: https://github.com/ipython/ipython/tree/rel-1.0.0/IPython -# The files in this package are extracted from IPython to aid the main loop integration -# See tests_mainloop for some manually runable tests - -# What we are doing is reusing the "inputhook" functionality (i.e. what in IPython -# ends up on PyOS_InputHook) and using it in the pydevconsole context. -# Rather that having the callbacks called in PyOS_InputHook, we use a custom XML-RPC -# Server (HookableXMLRPCServer) that calls the inputhook when idle diff --git a/.venv/lib/python3.10/site-packages/sklearn/externals/README b/.venv/lib/python3.10/site-packages/sklearn/externals/README deleted file mode 100644 index eef7ba7dd652e73413dad8ed1c6096dc4066d214..0000000000000000000000000000000000000000 --- a/.venv/lib/python3.10/site-packages/sklearn/externals/README +++ /dev/null @@ -1,7 +0,0 @@ -This directory contains bundled external dependencies that are updated -every once in a while. - -Note for distribution packagers: if you want to remove the duplicated -code and depend on a packaged version, we suggest that you simply do a -symbolic link in this directory. - diff --git a/README.md b/README.md index efc17d068d1ac7b2ccceb19bf17589a961716678..21c1c55c7b509514791736a0b30b77313642da4a 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,16 @@ # SpatioPath Project Overview + + + Welcome to the SpatioPath project, a comprehensive suite of tools designed for spatial statistical analysis and cell detection in biomedical images. This project consists of two main subprojects: + + + + + + 1. [SpatioPath](#spatiopath) 2. [CellDetection](#celldetection) @@ -111,3 +120,21 @@ The project is organized into two main subprojects: - `requirements.txt`: Dependencies for CellDetection. - `logs/`: Logs for TensorBoard visualization. + + + +## Acknowledgments + +We thank the authors of this work for their significant contributions: + +- **Mohamed M. Benimam**, **Vannary Meas-Yedid**, and **Suvadip Mukherjee** for their equal efforts. +- **Astri Frafjord** and **Alexandre Corthay** for their expertise and collaboration. +- **Thibault Lagache** and **Jean-Christophe Olivo-Marin** for their supervision and guidance. + +This work was made possible by contributions from: +- **Institut Pasteur, Université de Paris Cité, CNRS UMR 3691** (BioImage Analysis Unit, Paris, France). +- **Oslo University Hospital** and the **University of Oslo** (Tumor Immunology Lab and Hybrid Technology Hub, Oslo, Norway). + +For inquiries, contact the corresponding authors: [thibault.lagache@pasteur.fr](mailto:thibault.lagache@pasteur.fr), [jcolivo@pasteur.fr](mailto:jcolivo@pasteur.fr). + +