diff --git a/.classpath b/.classpath
index c27b0583990953e2a984c12e965fd71e0f9ebb43..f31c84e7ce44c2258c6866e15c14dbcda6aa1406 100644
--- a/.classpath
+++ b/.classpath
@@ -1,10 +1,48 @@
<?xml version="1.0" encoding="UTF-8"?>
<classpath>
- <classpathentry kind="src" path="src"/>
+ <classpathentry kind="src" path="src/main/java"/>
+ <classpathentry kind="src" path="src/main/resources"/>
+ <classpathentry kind="src" path="src/test/java"/>
<classpathentry kind="lib" path="/Icy-App/plugins/adufour/ezplug/EzPlug.jar"/>
<classpathentry kind="lib" path="/Icy-App/plugins/adufour/blocks/Blocks.jar"/>
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>
<classpathentry kind="var" path="ICY_JAR"/>
- <classpathentry kind="output" path="bin"/>
- <referencedentry kind="lib" path="D:/Stephane/Documents/dev/GIT/Icy-App/lib/scifio.jar" sourcepath="D:/Stephane/Documents/dev/GIT/bioformats"/>
+ <classpathentry kind="lib" path="F:/SDKs/Java/jdk1.8.0_241/lib/tools.jar"/>
+ <classpathentry kind="var" path="USER_HOME/SDKs/Java/jdk1.8.0_251/lib/tools.jar"/>
+ <classpathentry kind="var" path="USER_HOME/SDKs/Java/jdk1.8.0_251/lib/tools.jar"/>
+ <classpathentry kind="var" path="USER_HOME/SDKs/Java/jdk1.8.0_251/lib/tools.jar"/>
+ <classpathentry kind="var" path="USER_HOME/SDKs/Java/jdk1.8.0_251/lib/tools.jar"/>
+ <classpathentry kind="var" path="USER_HOME/SDKs/Java/jdk1.8.0_251/lib/tools.jar"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.bioimageanalysis.icy:icy-kernel:2.1.0"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: net.sf.ehcache:ehcache:2.10.6"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.slf4j:slf4j-api:1.7.25"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.bioimageanalysis.icy:icy-bioformats:6.3.1"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.bioimageanalysis.icy:icy-insubstantial:7.3.7"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.bioimageanalysis.icy:icy-vtk:6.3.0.1"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: net.imagej:ij:1.52q"/>
+ <classpathentry kind="lib" path="D:/SDKs/Java/jdk1.8.0_241/lib/tools.jar"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: javax.media:jai-core:1.1.3"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: javax.media:jai-codec:1.1.3"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.jogl:jogl-all:2.1.5-01"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.jogl:jogl-all-natives-linux-amd64:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.jogl:jogl-all-natives-linux-i586:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.jogl:jogl-all-natives-macosx-universal:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.jogl:jogl-all-natives-windows-amd64:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.jogl:jogl-all-natives-windows-i586:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.gluegen:gluegen-rt:2.1.5-01"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.gluegen:gluegen-rt-natives-linux-amd64:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.gluegen:gluegen-rt-natives-linux-i586:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.gluegen:gluegen-rt-natives-macosx-universal:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.gluegen:gluegen-rt-natives-windows-amd64:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.jogamp.gluegen:gluegen-rt-natives-windows-i586:2.1.5"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.javassist:javassist:3.22.0-GA"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: net.sourceforge.jexcelapi:jxl:2.6.12"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: log4j:log4j:1.2.14"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.swinglabs.swingx:swingx-all:1.6.5-1"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.bioimageanalysis.icy:icy-blocks:1.0.1"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.bioimageanalysis.icy:icy-protocols:3.0.9"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.bioimageanalysis.icy:icy-javadocparser:1.0.0"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: com.nativelibs4java:ochafik-util:0.12"/>
+ <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/Maven: org.bioimageanalysis.icy:icy-ezplug:3.15.13"/>
+ <classpathentry kind="output" path="target/classes"/>
</classpath>
diff --git a/.gitignore b/.gitignore
index 4d4be15bfb23be3e12d21529e4781399b209867f..18c1c4b324adf41df851fd5281471dcb9e2d0373 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,3 +1,10 @@
-bin
+bin/
+target/
+.settings/
pluginfile-sequence-blocks*.jar
+.idea/
+*.iml
+*.eml
+.project
+.classpath
diff --git a/pom.xml b/pom.xml
new file mode 100644
index 0000000000000000000000000000000000000000..7c8b1fb42f70ad23b8a1d5ad9c6125d1d67acb2e
--- /dev/null
+++ b/pom.xml
@@ -0,0 +1,45 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+
+ <parent>
+ <artifactId>pom-icy</artifactId>
+ <groupId>org.bioimageanalysis.icy</groupId>
+ <version>1.0.4</version>
+ </parent>
+
+ <artifactId>icy-sequence-blocks</artifactId>
+ <version>2.0.15</version>
+
+ <name>SequenceBlocks</name>
+
+ <properties>
+ <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
+ <jdk.version>1.8</jdk.version>
+
+ <maven.compiler.source>1.8</maven.compiler.source>
+ <maven.compiler.target>1.8</maven.compiler.target>
+ </properties>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.bioimageanalysis.icy</groupId>
+ <artifactId>icy-kernel</artifactId>
+ <version>2.1.0</version>
+ </dependency>
+ <dependency>
+ <groupId>org.bioimageanalysis.icy</groupId>
+ <artifactId>icy-blocks</artifactId>
+ <version>1.0.1</version>
+ </dependency>
+ </dependencies>
+
+ <repositories>
+ <repository>
+ <id>icy</id>
+ <url>https://icy-nexus.pasteur.fr/repository/Icy/</url>
+ </repository>
+ </repositories>
+</project>
\ No newline at end of file
diff --git a/src/plugins/tprovoost/sequenceblocks/SequenceBlocks.java b/src/main/java/plugins/tprovoost/sequenceblocks/SequenceBlocks.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/SequenceBlocks.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/SequenceBlocks.java
diff --git a/src/plugins/tprovoost/sequenceblocks/add/AddOverlays.java b/src/main/java/plugins/tprovoost/sequenceblocks/add/AddOverlays.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/add/AddOverlays.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/add/AddOverlays.java
diff --git a/src/plugins/tprovoost/sequenceblocks/add/AddRois.java b/src/main/java/plugins/tprovoost/sequenceblocks/add/AddRois.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/add/AddRois.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/add/AddRois.java
diff --git a/src/plugins/tprovoost/sequenceblocks/convert/ConvertColor.java b/src/main/java/plugins/tprovoost/sequenceblocks/convert/ConvertColor.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/convert/ConvertColor.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/convert/ConvertColor.java
diff --git a/src/plugins/tprovoost/sequenceblocks/convert/ConvertStack.java b/src/main/java/plugins/tprovoost/sequenceblocks/convert/ConvertStack.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/convert/ConvertStack.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/convert/ConvertStack.java
diff --git a/src/plugins/tprovoost/sequenceblocks/convert/ConvertType.java b/src/main/java/plugins/tprovoost/sequenceblocks/convert/ConvertType.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/convert/ConvertType.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/convert/ConvertType.java
diff --git a/src/plugins/tprovoost/sequenceblocks/convert/Resize.java b/src/main/java/plugins/tprovoost/sequenceblocks/convert/Resize.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/convert/Resize.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/convert/Resize.java
diff --git a/src/plugins/tprovoost/sequenceblocks/creation/CombineChannels.java b/src/main/java/plugins/tprovoost/sequenceblocks/creation/CombineChannels.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/creation/CombineChannels.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/creation/CombineChannels.java
diff --git a/src/plugins/tprovoost/sequenceblocks/creation/CreateSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/creation/CreateSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/creation/CreateSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/creation/CreateSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/creation/DuplicateSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/creation/DuplicateSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/creation/DuplicateSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/creation/DuplicateSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/extract/CropCZT.java b/src/main/java/plugins/tprovoost/sequenceblocks/extract/CropCZT.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/extract/CropCZT.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/extract/CropCZT.java
diff --git a/src/plugins/tprovoost/sequenceblocks/extract/CropSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/extract/CropSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/extract/CropSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/extract/CropSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/extract/ExtractChannel.java b/src/main/java/plugins/tprovoost/sequenceblocks/extract/ExtractChannel.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/extract/ExtractChannel.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/extract/ExtractChannel.java
diff --git a/src/plugins/tprovoost/sequenceblocks/extract/ExtractMultiChannels.java b/src/main/java/plugins/tprovoost/sequenceblocks/extract/ExtractMultiChannels.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/extract/ExtractMultiChannels.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/extract/ExtractMultiChannels.java
diff --git a/src/plugins/tprovoost/sequenceblocks/extract/ExtractSlice.java b/src/main/java/plugins/tprovoost/sequenceblocks/extract/ExtractSlice.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/extract/ExtractSlice.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/extract/ExtractSlice.java
diff --git a/src/plugins/tprovoost/sequenceblocks/extract/ExtractTime.java b/src/main/java/plugins/tprovoost/sequenceblocks/extract/ExtractTime.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/extract/ExtractTime.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/extract/ExtractTime.java
diff --git a/src/plugins/tprovoost/sequenceblocks/files/IsFileValid.java b/src/main/java/plugins/tprovoost/sequenceblocks/files/IsFileValid.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/files/IsFileValid.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/files/IsFileValid.java
diff --git a/src/plugins/tprovoost/sequenceblocks/files/LoadMetadata.java b/src/main/java/plugins/tprovoost/sequenceblocks/files/LoadMetadata.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/files/LoadMetadata.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/files/LoadMetadata.java
diff --git a/src/plugins/tprovoost/sequenceblocks/files/LoadSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/files/LoadSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/files/LoadSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/files/LoadSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/files/LoadSubSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/files/LoadSubSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/files/LoadSubSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/files/LoadSubSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/files/SaveMetadata.java b/src/main/java/plugins/tprovoost/sequenceblocks/files/SaveMetadata.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/files/SaveMetadata.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/files/SaveMetadata.java
diff --git a/src/plugins/tprovoost/sequenceblocks/files/SaveSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/files/SaveSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/files/SaveSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/files/SaveSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/images/AddImage.java b/src/main/java/plugins/tprovoost/sequenceblocks/images/AddImage.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/images/AddImage.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/images/AddImage.java
diff --git a/src/plugins/tprovoost/sequenceblocks/images/AsImageArray.java b/src/main/java/plugins/tprovoost/sequenceblocks/images/AsImageArray.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/images/AsImageArray.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/images/AsImageArray.java
diff --git a/src/plugins/tprovoost/sequenceblocks/images/GetImage.java b/src/main/java/plugins/tprovoost/sequenceblocks/images/GetImage.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/images/GetImage.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/images/GetImage.java
diff --git a/src/plugins/tprovoost/sequenceblocks/images/RemoveImage.java b/src/main/java/plugins/tprovoost/sequenceblocks/images/RemoveImage.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/images/RemoveImage.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/images/RemoveImage.java
diff --git a/src/plugins/tprovoost/sequenceblocks/images/SetImage.java b/src/main/java/plugins/tprovoost/sequenceblocks/images/SetImage.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/images/SetImage.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/images/SetImage.java
diff --git a/src/plugins/tprovoost/sequenceblocks/importer/PositionedSequenceFileImporter.java b/src/main/java/plugins/tprovoost/sequenceblocks/importer/PositionedSequenceFileImporter.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/importer/PositionedSequenceFileImporter.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/importer/PositionedSequenceFileImporter.java
diff --git a/src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterClose.java b/src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterClose.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterClose.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterClose.java
diff --git a/src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetImage.java b/src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetImage.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetImage.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetImage.java
diff --git a/src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetMetadata.java b/src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetMetadata.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetMetadata.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetMetadata.java
diff --git a/src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetThumbnail.java b/src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetThumbnail.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetThumbnail.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetThumbnail.java
diff --git a/src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetTileSize.java b/src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetTileSize.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetTileSize.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterGetTileSize.java
diff --git a/src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterLoadSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterLoadSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterLoadSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterLoadSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterOpen.java b/src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterOpen.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterOpen.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/importer/SequenceFileImporterOpen.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/CreateLinearColormap.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/CreateLinearColormap.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/CreateLinearColormap.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/CreateLinearColormap.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/Dimensions.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/Dimensions.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/Dimensions.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/Dimensions.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/EzVarColormap.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/EzVarColormap.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/EzVarColormap.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/EzVarColormap.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetChannelName.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetChannelName.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetChannelName.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetChannelName.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetChannelsName.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetChannelsName.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetChannelsName.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetChannelsName.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetColormap.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetColormap.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetColormap.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetColormap.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetColormaps.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetColormaps.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetColormaps.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetColormaps.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetDataType.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetDataType.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetDataType.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetDataType.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetFileName.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetFileName.java
similarity index 97%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetFileName.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetFileName.java
index 2bf3699ee50a8651b20df613489457db5bc6e286..477a91549d9c19cffc6ad3aa69f178a3ca2b3cc5 100644
--- a/src/plugins/tprovoost/sequenceblocks/infos/GetFileName.java
+++ b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetFileName.java
@@ -42,7 +42,7 @@ public class GetFileName extends Plugin implements SequenceBlock, PluginBundled
result = FileUtil.getFileName(result);
// remove extension ?
if (!withExtension.getValue().booleanValue())
- result = FileUtil.setExtension(result, "");
+ FileUtil.setExtension(result, "");
filename.setValue(result);
}
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetMetaData.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetMetaData.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetMetaData.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetMetaData.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetName.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetName.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetName.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetName.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetOutputFilename.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetOutputFilename.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetOutputFilename.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetOutputFilename.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetResolution.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetResolution.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetResolution.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetResolution.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/GetRoisAsRegion.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/GetRoisAsRegion.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/GetRoisAsRegion.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/GetRoisAsRegion.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/ReadMetadata.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/ReadMetadata.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/ReadMetadata.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/ReadMetadata.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/SetChannelName.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/SetChannelName.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/SetChannelName.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/SetChannelName.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/SetChannelsName.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/SetChannelsName.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/SetChannelsName.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/SetChannelsName.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/SetColormap.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/SetColormap.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/SetColormap.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/SetColormap.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/SetColormaps.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/SetColormaps.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/SetColormaps.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/SetColormaps.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/SetName.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/SetName.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/SetName.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/SetName.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/SetResolution.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/SetResolution.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/infos/SetResolution.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/SetResolution.java
diff --git a/src/plugins/tprovoost/sequenceblocks/infos/VarColormap.java b/src/main/java/plugins/tprovoost/sequenceblocks/infos/VarColormap.java
similarity index 97%
rename from src/plugins/tprovoost/sequenceblocks/infos/VarColormap.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/infos/VarColormap.java
index d1776836e52a74e0452f8cc35bfb7b1add7c1203..017f8b950f6b668f493e16b8085eebd77cd6913a 100644
--- a/src/plugins/tprovoost/sequenceblocks/infos/VarColormap.java
+++ b/src/main/java/plugins/tprovoost/sequenceblocks/infos/VarColormap.java
@@ -50,7 +50,7 @@ public class VarColormap extends Var<IcyColorMap>
// create the var editor (combo box type here)
final ComboBox<IcyColorMap> result = new ComboBox<IcyColorMap>(this);
// get the editor component
- final JComboBox<?> combo = result.getEditorComponent();
+ final JComboBox combo = result.getEditorComponent();
// and set a specific renderer
combo.setRenderer(new ColormapComboBoxRenderer(combo));
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceChannelBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceChannelBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceChannelBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceChannelBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterChannelBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterChannelBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterChannelBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterChannelBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterFrameBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterFrameBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterFrameBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterFrameBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterRegionBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterRegionBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterRegionBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterRegionBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterSeriesBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterSeriesBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterSeriesBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterSeriesBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterSliceBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterSliceBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterSliceBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterSliceBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterTileBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterTileBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterTileBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFileImporterTileBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceFrameBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFrameBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceFrameBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceFrameBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceRegionBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceRegionBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceRegionBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceRegionBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/loop/SequenceSliceBatch.java b/src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceSliceBatch.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/loop/SequenceSliceBatch.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/loop/SequenceSliceBatch.java
diff --git a/src/plugins/tprovoost/sequenceblocks/op/AdditiveFillSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/op/AdditiveFillSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/op/AdditiveFillSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/op/AdditiveFillSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/op/FillInnerSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/op/FillInnerSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/op/FillInnerSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/op/FillInnerSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/op/FillOuterSequence.java b/src/main/java/plugins/tprovoost/sequenceblocks/op/FillOuterSequence.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/op/FillOuterSequence.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/op/FillOuterSequence.java
diff --git a/src/plugins/tprovoost/sequenceblocks/remove/RemoveAllRois.java b/src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveAllRois.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/remove/RemoveAllRois.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveAllRois.java
diff --git a/src/plugins/tprovoost/sequenceblocks/remove/RemoveChannel.java b/src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveChannel.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/remove/RemoveChannel.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveChannel.java
diff --git a/src/plugins/tprovoost/sequenceblocks/remove/RemoveFrame.java b/src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveFrame.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/remove/RemoveFrame.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveFrame.java
diff --git a/src/plugins/tprovoost/sequenceblocks/remove/RemoveOverlays.java b/src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveOverlays.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/remove/RemoveOverlays.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveOverlays.java
diff --git a/src/plugins/tprovoost/sequenceblocks/remove/RemoveRois.java b/src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveRois.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/remove/RemoveRois.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveRois.java
diff --git a/src/plugins/tprovoost/sequenceblocks/remove/RemoveSlice.java b/src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveSlice.java
similarity index 100%
rename from src/plugins/tprovoost/sequenceblocks/remove/RemoveSlice.java
rename to src/main/java/plugins/tprovoost/sequenceblocks/remove/RemoveSlice.java
diff --git a/res/SequenceBlocks.xml b/src/main/resources/SequenceBlocks.xml
similarity index 100%
rename from res/SequenceBlocks.xml
rename to src/main/resources/SequenceBlocks.xml
diff --git a/res/SequenceBlocks_icon.png b/src/main/resources/SequenceBlocks_icon.png
similarity index 100%
rename from res/SequenceBlocks_icon.png
rename to src/main/resources/SequenceBlocks_icon.png