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# Xuggler

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This is the repository for the source code of *Xuggler*, a plugin for the [bioimage analysis software Icy](http://icy.bioimageanalysis.org/), which was developed by members or former members of the [Biological Image Analysis unit at Institut Pasteur](https://research.pasteur.fr/en/team/bioimage-analysis/). This plugin is licensed under GPL3 license.     
Icy is developed and maintained by [Biological Image Analysis unit at Institut Pasteur](https://research.pasteur.fr/en/team/bioimage-analysis/). The [source code of Icy](https://gitlab.pasteur.fr/bia/icy) is also licensed under a GPL3 license.     



## Plugin description

<!-- Short description of goals of package, with descriptive links to the documentation website --> 
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Xuggler is the easy way to uncompress, modify, and re-compress any media file (or stream) from Java. See licensing for licensing information.
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A more detailed user documentation can be found on the Xuggler documentation page on the Icy website: http://icy.bioimageanalysis.org/plugin/xuggler-library-for-icy/               


## Installation instructions

For end-users, refer to the documentation on the Icy website on [how to install an Icy plugin](http://icy.bioimageanalysis.org/tutorial/how-to-install-an-icy-plugin/).      

For developers, see our [Contributing guidelines](https://gitlab.pasteur.fr/bia/icy/-/blob/master/CONTRIBUTING.md) and [Code of Conduct](https://gitlab.pasteur.fr/bia/icy/-/blob/master/CODE-OF-CONDUCT.md).      

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## Main functions and usage

<!-- list main functions, explain architecture, classname, give info on how to get started with the plugin. If applicable, how the package compares to other similar packages and/or how it relates to other packages -->

Classname: `plugins.stef.library.XugglerPlugin`



## Citation 

Please cite this plugins as follows:          


Please also cite the Icy software and mention the version of Icy you used (bottom right corner of the GUI or first lines of the Output tab):     
de Chaumont, F. et al. (2012) Icy: an open bioimage informatics platform for extended reproducible research, [Nature Methods](https://www.nature.com/articles/nmeth.2075), 9, pp. 690-696       
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http://icy.bioimageanalysis.org    
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## Author(s)      

Stephane Dallongeville


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## Additional information
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