Commits · master · bis-aria / ariaec

Jan 17, 2020
- fix(conbox): sort conio contact list by score · 0243d85f
  Benjamin BARDIAUX authored Jan 17, 2020
  
  benchmark_version
  
  0243d85f
Oct 04, 2019
- fix(core): check if restraint is list rather than lengh · 8a05794a
  Benjamin BARDIAUX authored Oct 04, 2019
  
  8a05794a
- fix(core): change condition for ss restraints · ab140a0d
  Fabrice ALLAIN authored Oct 04, 2019
  
  ab140a0d
- Fix issues when XML restraint list contains only one restraint · 140da939
  Benjamin BARDIAUX authored Oct 04, 2019
  
  140da939
- Merge branch 'patch-1' into 'master' · ae4782de
  Fabrice ALLAIN authored Oct 04, 2019
```
fix(conbox): add not conditions in tbl2xml

See merge request bis-aria/ariaec!20
```
  ae4782de
- fix(conbox): add not conditions in tbl2xml · cf6db51b
  Nathalie DUCLERT-SAVATIER authored Oct 04, 2019
  
  cf6db51b
- Update README.md · 0c3cdd61
  Fabrice ALLAIN authored Oct 04, 2019
  
  0c3cdd61
- fix(conbox): add checks for atoms during restraints conversion · 2a12b7ef
  Fabrice ALLAIN authored Oct 04, 2019
  
  2a12b7ef
Oct 01, 2019
- update clustering settings before restarts · 3ce8b56a
  Benjamin BARDIAUX authored Oct 01, 2019
  
  3ce8b56a
Sep 30, 2019
- Fix clustering when restrating from previous iteration · e6d337e6
  Benjamin BARDIAUX authored Sep 30, 2019
  
  e6d337e6
Sep 23, 2019
- Running korp in local directory to avoid long paths issue · dfcf3e87
  Benjamin BARDIAUX authored Sep 23, 2019
  
  dfcf3e87
- Merge branch 'nathsav-master-patch-97879' into 'master' · 0e1ed44f
  Fabrice ALLAIN authored Sep 23, 2019
```
Update src/aria/core/StructureEnsemble.py

See merge request bis-aria/ariaec!19
```
  0e1ed44f
- Update src/aria/core/StructureEnsemble.py · 1a44d7a4
  Nathalie DUCLERT-SAVATIER authored Sep 23, 2019
  
  1a44d7a4
Sep 19, 2019
- Merge branch 'patch-2' into 'master' · 74b856bb
  Fabrice ALLAIN authored Sep 19, 2019
```
clustering_sort_criterion added

See merge request bis-aria/ariaec!18
```
  74b856bb
- Merge branch 'patch-1' into 'master' · 90861c7e
  Fabrice ALLAIN authored Sep 19, 2019
```
addition of the clustering_sort_criterion

See merge request bis-aria/ariaec!17
```
  90861c7e
- clustering_sort_criterion added · 969ef968
  Nathalie DUCLERT-SAVATIER authored Sep 19, 2019
  
  969ef968
- addition of the clustering_sort_criterion · c998f658
  Nathalie DUCLERT-SAVATIER authored Sep 19, 2019
  
  c998f658
Sep 18, 2019
- fix: avoid init issue when using korp as sort_criterion · 0866b8ab
  Fabrice ALLAIN authored Sep 18, 2019
  
  0866b8ab
- doc: updated todo lists · cb7df423
  Fabrice ALLAIN authored Sep 18, 2019
  
  cb7df423
Sep 17, 2019
- Adding korpe scoring criterion and SS restraints as XML with --ssxml option in setup · 443ecc09
  Benjamin Bardiaux authored Sep 17, 2019
  
  443ecc09
Jul 31, 2019
- fix: avoid empty violation files if there is substitutions in the reference file · 73d44e48
  Fabrice ALLAIN authored Jul 31, 2019
  
  73d44e48
Jul 30, 2019
- feat: tbl2xml will take into account empty tbl files · b8641524
  Fabrice ALLAIN authored Jul 30, 2019
  
  b8641524
- feat: tbl2xml will take into account empty tbl files · 1c9f5396
  Fabrice ALLAIN authored Jul 30, 2019
  
  1c9f5396
Jul 29, 2019
- Merge branch 'master' of gitlab.pasteur.fr:bis-aria/ariaec · ca6b27d1
  Fabrice ALLAIN authored Jul 29, 2019
  
  ca6b27d1
- feat: support connit alias for tbl2xml command · dd414fac
  Fabrice ALLAIN authored Jul 29, 2019
  
  dd414fac
Jul 25, 2019
- Merge branch '39-support-ss-type-format-for-secondary-structure-predictions' into 'master' · fa0951f3
  Fabrice ALLAIN authored Jul 25, 2019
```
feat: support ss format

Closes #39

See merge request bis-aria/ariaec!16
```
  fa0951f3
- feat: support ss format · 215ab225
  Fabrice ALLAIN authored Jul 25, 2019
  
  215ab225
Jul 22, 2019
- Add LICENSE · 79f33d7c
  Fabrice ALLAIN authored Jul 22, 2019
  
  79f33d7c
- Update README.md · 9ba7948a
  Fabrice ALLAIN authored Jul 22, 2019
  
  9ba7948a
Jul 19, 2019
- Update .gitlab-ci.yml · 1a594778
  Fabrice ALLAIN authored Jul 19, 2019
  
  1a594778
Jul 18, 2019
- Update README.md · f3ce795d
  Fabrice ALLAIN authored Jul 18, 2019
  
  f3ce795d
Jul 16, 2019
- Merge branch '38-multiple-clustering-parameters' into 'master' · dfc86f60
  Fabrice ALLAIN authored Jul 16, 2019
```
feat: close issue #38

Closes #38

See merge request bis-aria/ariaec!15
```
  dfc86f60
- feat: close issue #38 · e192cd91
  Fabrice ALLAIN authored Jul 16, 2019
  
  e192cd91
- fix: solve permission issues for mako tempfile if there is more than one user... · a2b16848
  Fabrice ALLAIN authored Jul 16, 2019
```
fix: solve permission issues for mako tempfile if there is more than one user on the same filesystem
```
  a2b16848
Jul 15, 2019
- fix: fix log output issue if a similar file from another user already exists · afdd936e
  Fabrice ALLAIN authored Jul 15, 2019
  
  afdd936e
- fix: solve raptorx missing alias · 41e8a4f7
  Fabrice ALLAIN authored Jul 15, 2019
  
  41e8a4f7
- refactor: change casp alias for conkit · 610e1e0f
  Fabrice ALLAIN authored Jul 15, 2019
  
  610e1e0f
Jul 11, 2019
- *: update tutorial doc & fix logger issue during cache data due to the previous rolleback · d46870ae
  Fabrice ALLAIN authored Jul 11, 2019
  
  d46870ae
Jul 10, 2019
- *: update tutorial & fix NoneType issue for pdbqual when path are missing in the configuration file · 13213dd3
  Fabrice ALLAIN authored Jul 10, 2019
  
  13213dd3
Jul 09, 2019
- Merge branch '36-error-during-conversion-table-loading' into 'master' · f891072c
  Fabrice ALLAIN authored Jul 09, 2019
```
Resolve "Error during Conversion Table loading"

Closes #36

See merge request bis-aria/ariaec!14
```
  f891072c