From 379e744e73f8aea43d2e3c6068211d3fc102b4cc Mon Sep 17 00:00:00 2001
From: Blaise Li <blaise.li__git@nsup.org>
Date: Thu, 1 Feb 2018 16:42:06 +0100
Subject: [PATCH] Fixing syntax error.
---
small_RNA-seq/small_RNA-seq.snakefile | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/small_RNA-seq/small_RNA-seq.snakefile b/small_RNA-seq/small_RNA-seq.snakefile
index 3b94aa0..a37b09f 100644
--- a/small_RNA-seq/small_RNA-seq.snakefile
+++ b/small_RNA-seq/small_RNA-seq.snakefile
@@ -3812,7 +3812,7 @@ rule explore_counts:
save_plot(output.zscore_clustermap, plot_clustermap, zscore_data, gene_colours, "zscore",
title="Clustering of %sRNA based on standardized (z-score) expression level" % wildcards.small_type)
else:
- warnings.warn(f"Not enough usable data points to compute clustermap for {wildcards.contrast}_{wildcards.small_type}"
+ warnings.warn(f"Not enough usable data points to compute clustermap for {wildcards.contrast}_{wildcards.small_type}")
# Make the file empty
open(output.zscore_clustermap, "w").close()
#unit_data = pd.read_table(
@@ -3822,7 +3822,7 @@ rule explore_counts:
#save_plot(output.unit_clustermap, plot_clustermap, unit_data, gene_colours, "unit",
# title="Clustering of %sRNA based on normalized (L2) expression level" % wildcards.small_type)
else:
- warnings.warn("No up or down regulated genes for {wildcards.contrast}_{wildcards.small_type}"
+ warnings.warn(f"No up or down regulated genes for {wildcards.contrast}_{wildcards.small_type}")
# Make the file empty
open(output.zscore_clustermap, "w").close()
--
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