Manually trying to fix requirements.txt

requirements.txt

@@ -3,7 +3,7 @@ appdirs==1.4.3
 attrs==19.3.0
 Babel==2.8.0
 # Editable install with no version control (bam25prime==0.1)
--e /usr/local/lib/python3.7/site-packages
+-e git+https://bioinfo_utils:UTSWyWVPdw_kbxWR7-zD@gitlab.pasteur.fr/bli/bam25prime.git@b54d1ca837f41e1b8eaf1b7984d4799ca2cc50e4#egg=bam25prime==0.1
 beautifulsoup4==4.8.2
 bs4==0.0.1
 certifi==2019.11.28
@@ -33,14 +33,14 @@ jupyter-core==4.6.1
 kiwisolver==1.1.0
 libcelegans==0.1
 # Editable install with no version control (libdeseq==0.2)
--e /usr/local/lib/python3.7/site-packages
+-e git+https://bioinfo_utils:uqiFbzWyBtzxYn7br82P@gitlab.pasteur.fr/bli/libdeseq.git@c4928c62ba6875dbe83e77caceb7265a7a81045d#egg=libdeseq==0.2
 # Editable install with no version control (libhts==0.2)
--e /usr/local/lib/python3.7/site-packages
+-e git+https://bioinfo_utils:DP-sqNot8AdsMek_KJiC@gitlab.pasteur.fr/bli/libhts.git@c4715fde8bf617a87906d9349432b2beb9462a43#egg=libhts==0.2
 libreads==0.2
 # Editable install with no version control (libsmallrna==0.2)
--e /usr/local/lib/python3.7/site-packages
+-e git+https://bioinfo_utils:FjgTxcUGPsGVQ-yZZVyS@gitlab.pasteur.fr/bli/libsmallrna.git@89178795d9dd148b1780a490b70c705b58a64b12#egg=libsmallrna==0.2
 # Editable install with no version control (libworkflows==0.2)
--e /usr/local/lib/python3.7/site-packages
+-e git+https://bioinfo_utils:tfuTQsSZWMtC5xXJNFJh@gitlab.pasteur.fr/bli/libworkflows.git@4b3859c4c852c518b18d809954b60d8ce00c5d15#egg=libworkflows==0.2
 mappy==2.17
 MarkupSafe==1.1.1
 matplotlib==3.1.2
@@ -82,7 +82,7 @@ six==1.14.0
 smmap2==2.0.5
 snakemake==5.10.0
 # Editable install with no version control (snakemake-wrappers==0.3)
--e /usr/local/lib/python3.7/site-packages
+-e git+https://bioinfo_utils:Ues9rP1tyfzs1zs5BzpY@gitlab.pasteur.fr/bli/snakemake_wrappers.git@1e96ee88d41b9fdc7c15157d15041cbfe34fbc44#egg=snakemake-wrappers==0.3
 snowballstemmer==2.0.0
 soupsieve==1.9.5
 Sphinx==2.3.1