Commit d641f506 authored by Blaise Li's avatar Blaise Li
Browse files

Try to fix sRNA fastq writing issue.

Function writing fastq was likely prematurely closing files due to wrong
sRNA name (tRF instead of tRFRNA).
parent d35d737f
libsmallrna @ 6438ba5a
Subproject commit 28819f1a3b2bb05f72068fe5da81d05a7e5d093b
Subproject commit 6438ba5a2489db60401160099c2ea358718c9b80
......@@ -1811,7 +1811,7 @@ rule gather_small_RNA_counts:
elif wildcards.small_type == "mi":
drop = ["miRNA"]
elif wildcards.small_type == "tRF":
drop = ["tRF"]
drop = ["tRFRNA"]
elif wildcards.small_type in {
*{f"prot_si_{suffix}" for suffix in SI_SUFFIXES},
*{f"prot_siu_{suffix}" for suffix in SI_SUFFIXES}}:
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment