1. 30 Oct, 2019 1 commit
  2. 28 Oct, 2019 2 commits
  3. 14 Oct, 2019 1 commit
  4. 17 May, 2019 1 commit
  5. 09 May, 2019 1 commit
  6. 16 Apr, 2019 1 commit
  7. 05 Oct, 2018 1 commit
  8. 04 Oct, 2018 1 commit
  9. 05 Sep, 2018 1 commit
    • Blaise Li's avatar
      Generalizing translation efficiency. · 1438776f
      Blaise Li authored
      This is now used for degradation efficiency too.
      The general concept is to compute a fold of TPM bewteen library types.
      TE is for Ribo / RNA, DE is for Degradome / RNA.
      1438776f
  10. 10 Aug, 2018 1 commit
  11. 01 Aug, 2018 1 commit
  12. 22 Jun, 2018 1 commit
  13. 14 Jun, 2018 1 commit
  14. 01 Jun, 2018 1 commit
  15. 18 May, 2018 1 commit
  16. 17 May, 2018 1 commit
  17. 15 May, 2018 1 commit
  18. 09 May, 2018 2 commits
  19. 30 Apr, 2018 2 commits
  20. 27 Apr, 2018 1 commit
  21. 20 Apr, 2018 2 commits
  22. 16 Apr, 2018 1 commit
  23. 11 Apr, 2018 3 commits
  24. 23 Mar, 2018 1 commit
  25. 08 Mar, 2018 2 commits
  26. 06 Mar, 2018 1 commit
  27. 05 Mar, 2018 3 commits
  28. 23 Feb, 2018 1 commit
    • Blaise Li's avatar
      Edits for base composition, cleanup, pi targets. · 44dff0d4
      Blaise Li authored
      Fixing base composition files. Use mappy instead of pyGATB.
      
      Inactivating metaprofile around piRNA target sites due to problems with
      bedtools.
      
      Moved cleanup and backup to common library.
      
      Optional automatic directory layout.
      44dff0d4
  29. 19 Feb, 2018 1 commit
  30. 16 Feb, 2018 1 commit
  31. 02 Feb, 2018 1 commit