requirements.txt 624 Bytes
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Cython
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# libbamutils @ git+https://gitlab.pasteur.fr/bli/libbamutils.git@147fd584d1d3fbd8166bb11790ce96cb16ff7f83
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libworkflows @ git+https://gitlab.pasteur.fr/bli/libworkflows.git@b29b854ff1db6c87386007808286207b8af11b9d
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libbamutils @ git+https://gitlab.pasteur.fr/bli/libbamutils.git
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# libworkflows @ git+https://gitlab.pasteur.fr/bli/libworkflows.git
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matplotlib
networkx
numpy
pandas
pyBigWig
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# pybedtools @ git+https://github.com/blaiseli/pybedtools.git@fix_missing_headers --global-option="cythonize"
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pybedtools @ git+https://github.com/blaiseli/pybedtools.git@issue-343
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# pybedtools
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# scipy<=1.3.3
scipy>=1.4.2
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seaborn