From 3ca1b698a139bf49d08360eba04a8a2725bb460f Mon Sep 17 00:00:00 2001
From: Blaise Li <blaise.li__git@nsup.org>
Date: Tue, 29 Oct 2019 14:55:27 +0100
Subject: [PATCH] Avoid having a broken pybedtools installation.
This could "compete" with the fixed one, and cause missing headers
issues.
---
setup.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/setup.py b/setup.py
index 5e771f4..473bac6 100644
--- a/setup.py
+++ b/setup.py
@@ -28,7 +28,7 @@ setup(
"numpy",
"pandas",
"pyBigWig",
- "pybedtools",
+ "pybedtools @ git+https://github.com/blaiseli/pybedtools.git@fix_missing_headers",
"scipy",
"seaborn"],
#dependency_links=["git+https://gitlab.pasteur.fr/bli/libworkflows@744dd79b579577cb6e131653260d7990946be3ad#egg=libworkflows-0.1"],
--
GitLab