From e78f5d0ce8487f8c226e1585b364789f47832e8f Mon Sep 17 00:00:00 2001
From: Blaise Li <blaise.li__git@nsup.org>
Date: Wed, 10 Jul 2024 13:19:58 +0200
Subject: [PATCH] Revert "Make link_raw_data a local rule."
Not compatible with Snakemake version 5.
This reverts commit dc5e29ac5bdbf70650865901927ba549ef4a565e.
---
smincludes/link_raw_data.rules | 1 -
1 file changed, 1 deletion(-)
diff --git a/smincludes/link_raw_data.rules b/smincludes/link_raw_data.rules
index e4dee3a..497820b 100644
--- a/smincludes/link_raw_data.rules
+++ b/smincludes/link_raw_data.rules
@@ -29,7 +29,6 @@ rule link_raw_data:
raw = lib2data,
output:
link = os.path.join(data_dir, "{lib}_{rep}.fastq.gz"),
- localrule: True
message:
"Making link {output.link} to raw data {input.raw}."
run:
--
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