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2D viewer for behaving larvae, with manual and automatic behavior tagging capabilities

Interface between MaggotUBA and the Nyx tagging UI

No code here, only artefacts, mostly to feed the CI with data

MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.

compress nd2 files

Backbone for automatic tagging backends; includes a Python implementation of PlanarLarvae.jl features and the Julia-Python communication layer

https://hub.pages.pasteur.fr/rshiny-k8s/

Public copy of gitlab.pasteur.fr/les-larves/maggotuba#light-stable-for-tagging Courtesy of A. Blanc

General python code for analysis pipeline

One is the interaction layer between the Alyx database (metadatas) and your programmatic interface (python).

Projects specific python code pipeline for analysis