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Some wrappers for my snakemake HTS pipelines
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Quality-aware fastq demultiplexer. The goal is to demultiplex fastq files where the barcode is contained in the read at a known position.
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Django based project to build metagenomics genes catalog
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compress nd2 files
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The impact of genetic diversity on gene essentiality within the E. coli species
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The impact of genetic diversity on gene essentiality within the E. coli species
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Local z-projection via the determination of a plane of reference.
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Deprojection of a 2D segmentation onto a 2.5D mesh
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Material for Diderot 2020-2021
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Utilities to cluster sequences.
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Utilities to make a consensus from a sequence alignment.
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Workflow that takes raw legiolist data and process it to be integrated in a legiolist intermine instance
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legiolist deployment
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