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A module handling basic fonctionnality needed in django project such as base.html using bootstrap, account settings, preferences management, ...

https://hub.pages.pasteur.fr/shiny-k8s/

This project contains the latest PhageTerm software source repository (multi machine version).

sPYce is a since cell and single nucleus ATAC-seq integration method across different species implemented in Python.

FASTQ summary

Proxmox PVE.

Learning using it.

A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.

Data and code of the article Rasoamalala et al. "Unraveling the role of rat and flea population dynamics on the seasonality of plague epidemics in Madagascar", Proceedings of the National Academy of Sciences (2025).