Explore projects

This repository contains all the scripts used for the development of core genome MLST schemes for Klebsiella pneumoniae sensu stricto and two of its sublineages SL147 and SL307.

Inferring alien oligonucleotides (adapter, primer, index, barcode, ...) without any prior or external knowledge

coverage profile from read alignments

2D viewer for behaving larvae, with manual and automatic behavior tagging capabilities

This project serves as a repository for the code necessary for Pinon et al. 2025 paper.

Icy is an open community platform for bioimage informatics

https://bbrancot.pages.pasteur.fr/prog-web-client-server/

Système de Traitement des Recrutements Automatisé et Super Simplifié

Common parent POM for all Icy related projects

https://hub.pages.pasteur.fr/shiny-k8s/