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Downloading genome assembly files from GenBank or RefSeq

Downloading FASTQ files from ENA

iPPI-DB - django application

Icy is an open community platform for bioimage informatics

2D viewer for behaving larvae, with manual and automatic behavior tagging capabilities

Common parent POM for all Icy related projects

Interface between MaggotUBA and the Nyx tagging UI

Backbone for automatic tagging backends; includes a Python implementation of PlanarLarvae.jl features and the Julia-Python communication layer

A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

Shiny app for the analysis of single cell data

General python code for analysis pipeline