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Bio-Formats library patched for Icy. The patch consist of replacing Apache Commons IO library by a newer version and also replacing org.json library with the custom version embedded into Micro-Manager to make it work properly.

Script Editor plugin for Icy

Deprojection of a 2D segmentation onto a 2.5D mesh

Google FlatBuffers library for Icy https://github.com/google/flatbuffers

The Bytedeco JavaCPP library for Icy

https://github.com/bytedeco/javacpp

The Oshi core library (JDK6) for Icy

https://github.com/oshi/oshi

The Java Native Access (JNA) library for Icy

https://github.com/java-native-access/jna

This repo contains the script, model and parameters needed to train a StarDist model on the simulated dataset used in the ISBI Grand Challenge on Single-Particle Tracking.

Embed CPython in Java through JNI

Local z-projection via the determination of a plane of reference.

This project is dedicated to protocol blocks generating random objects:

doubles integers subimages

MsgPack Core library for Icy.

https://msgpack.org/

Plugin Library used to provide autocompletion to JTextComponents, such as JTextArea or JTextField.

A tool to parse the javadoc of a file. Mostly used now by the Script Editor.

Rhino Library for Icy

Provides 3D vector mathematics classes.