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The Bytedeco JavaCPP library for Icy

https://github.com/bytedeco/javacpp

The Oshi core library (JDK6) for Icy

https://github.com/oshi/oshi

Fast Fourier Transform Plugin for Icy

Translating and back-translating codon and amino-acid sequence files

QuickHull library for Icy. Computes convex envelopes of random point sets in 2D or 3D.

The TensorFlow library manager plugin. This plugin allows users to choose the TF version to be used on runtime

This Icy bioimage analysis plugin was developped to help biologists detect late cytokinetic bridges on static immunofluorescence images.

Creating an AGP file from a FASTA-formatted scaffold sequence file

Intensity projection plugin. It does intensity project along depth or time with multiple algorithms: mean, max, median, variance, standard deviation, saturated sum. Projection can also be restricted to ROI.