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Rapid Peptides Generator (RPG) is a software dedicated to predict proteases-induced cleavage sites on amino acid sequences.

https://rapid-peptide-generator.readthedocs.io

LILAMS - Leucine Isotopic Labeling Analysis by MALDI-TOF mass Spectrometry was a Python software project to perform quantitative data analysis on mass spectrometry results for proteins labeled with heavy amino acids. Historical archive.

Maestro Cluster documentation

Running Jazayeri Simulations on Floelling Experiments

Backbone for automatic tagging backends; includes a Python implementation of PlanarLarvae.jl features and the Julia-Python communication layer

Quality-aware fastq demultiplexer. The goal is to demultiplex fastq files where the barcode is contained in the read at a known position.

openbabel rpm recipes for iPPI-DB. 2.4.1 is too old and buggy on fingerprints and tanimoto, so until the next release we use custom rpms