Explore projects

Finding Repeats Using BLAST

ID-based RAG FastAPI: Integration with Langchain and PostgreSQL/pgvector

Helm 3 charts to deploy a Supabase on Kubernetes

Utilities to collapse reads in bam files to their 5' end

https://bbrancot.pages.pasteur.fr/prog-web-client-server/

Some helpers for my HTS snakemake workflows.

docker image to build tensorflow on CentOS-6 x86_64

Backbone for automatic tagging backends; includes a Python implementation of PlanarLarvae.jl features and the Julia-Python communication layer

A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

Some experiments with parallel and functional programming.

searching and extracting universal single-copy genes from PhyloM:bacteria

majority-rule consensus of ML phylogenetic trees

Some helpers to call DESeq2 using rpy2 in python.